| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1131 |
|---|
| Symbol | |
|---|
| ID | 3909218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1299248 |
|---|
| End bp | 1300675 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637883024 |
|---|
| Product | FAD linked oxidase-like |
|---|
| Protein accession | YP_484752 |
|---|
| Protein GI | 86748256 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.27032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.530597 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCG CCAATCCGCC GCCGGCCACA GCGCTGTCGC CCGACTTGCT CGGGCGCTTC
GCCGCGATCG TCGGCGACCG ACACGCGCTG ACCGACCCGG CCGAACTCGA AGCCTATGTC
ACTGAGGAGC GCAATCTGTA TCGCGGCCAC TCGCCGCTGG TGCTGCGCCC GGGCTCTACC
GCGGAAGTCG CAGCGATCTG CAGGCTGGCG CACGAGGCGC GCGTCGCGCT GGTGCCGCAA
GGCGGCAACA CCGGGCTGGT CGGCGGGCAG ACGCCGCACC ACGGCGAGGT GGTGGTCTCG
CTGAAGCGGA TGGACAAGAT CCGCGACATC GACCTCGCAT CGAACACCAT GACGGTGGAG
GCCGGCGTGA TCCTGCAGCA TGCGCAGGAG CGCGCCGCCG ACGTCGACCG GCTGTTCCCG
CTGTCGCTCG GCGCGCAGGG CAGTTGCACC ATCGGCGGCA ATCTGTCGAC CAATGCCGGC
GGCACCGCCG CACTGGCCTA TGGACTGGCG CGCGACATGG CGCTCGGCAT CGAGGTCGTG
CTCGCCGACG GCCGCATCCT CGATCTGTTG TCGAAGCTGA AGAAGGACAA CACCGGCTAC
GATCTGCGCG ACCTGTTCAT CGGCGCCGAG GGCACGCTCG GCATCATCAC CGCGGCGACG
CTGAAGCTGT TTCCAAAGCC GCGCGCGGTC GCGACCGCCT TCGTCGGGCT GCCGTCGCCG
GCGGACGCGC TGAAGCTGCT CGGCATCGCG CAAGCCGAAG CCGCGGGCCA TCTCACCAGC
TTCGAACTGA TCGCCGAGAT CGCGCTGGAT TTCTCGGTGC GCCACGCTGC CAACCGCGAT
CCGCTGGAGA GCCGGCATCC ATGGTACGTG CTGATCGAAT TGTCGTCGAT GCGCGACGAC
GCAAGCGGCG CGCTGGAGGC GATCCTCGAA CAGGGCTTCG AGGCCGGCAT CGTCACCGAC
GCGGCGATCG CCGCCTCGCT CGCCCAGCAG CAGGCGTTCT GGAAACTGCG CGAGGAGATC
TCGCCGGCGC AGAAGCCGGA GGGCGGCTCG ATCAAGCACG ACGTCTCGGT GCCGATCGCC
GCAGTGCCTG AGTTCATCGA ACAAGCCAAT GCGGCGGTGG TGAAGCTGAT CCCCGGCGCG
CGGCCGGTGC CGTTCGGCCA TCTCGGCGAC GGCAACATCC ACTACAACGT CACCCAGCCG
CTCGGCGCCG ACAAGGCCGC GTATCTGGCG CGTTGGCACG AGGTCAACAA AGTCGTGTTC
GACGTGGTGC TGCGGCTCGG CGGCTCGATC TCGGCCGAGC ACGGCATCGG CGTGCTGAAG
CGCGACGACC TGCCCGCCGT GAAGGACAAG ACCGCGATCG ACCTGATGCG CGCCATCAAG
GCGACGCTCG ATCCGCTCGG CATCATGAAT CCGGGGAAGG TGGTGTAG
|
|---|
| Protein sequence | MTIANPPPAT ALSPDLLGRF AAIVGDRHAL TDPAELEAYV TEERNLYRGH SPLVLRPGST
AEVAAICRLA HEARVALVPQ GGNTGLVGGQ TPHHGEVVVS LKRMDKIRDI DLASNTMTVE
AGVILQHAQE RAADVDRLFP LSLGAQGSCT IGGNLSTNAG GTAALAYGLA RDMALGIEVV
LADGRILDLL SKLKKDNTGY DLRDLFIGAE GTLGIITAAT LKLFPKPRAV ATAFVGLPSP
ADALKLLGIA QAEAAGHLTS FELIAEIALD FSVRHAANRD PLESRHPWYV LIELSSMRDD
ASGALEAILE QGFEAGIVTD AAIAASLAQQ QAFWKLREEI SPAQKPEGGS IKHDVSVPIA
AVPEFIEQAN AAVVKLIPGA RPVPFGHLGD GNIHYNVTQP LGADKAAYLA RWHEVNKVVF
DVVLRLGGSI SAEHGIGVLK RDDLPAVKDK TAIDLMRAIK ATLDPLGIMN PGKVV
|
|---|
| |