Gene RPB_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1114 
Symbol 
ID3910200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1284381 
End bp1285016 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content68% 
IMG OID637883007 
Productmetal dependent phosphohydrolase 
Protein accessionYP_484735 
Protein GI86748239 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.289727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.182535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTG CCGCCAAAAC CTCCAGCACC GCTCCCAGGA CATCGCAAGC CTCCGCCCGG 
GTCTGGCAGC GGATGCTGTC CGGCCGCCGG CTTGATTTGC TCGATCCGTC GCCGCTGGAT
GTCGAAATCG CCGATATTGC CCACGGTCTG GCGCGGGTCG CGCGCTGGAA CGGCCAGACC
AGCGGTGCGC ACATCTTCTC GGTGGCGCAG CATACGCTGC TGGTCGAGGC GGTGATGCGC
GAGAAGAGCC CCCGGGTCGA CGCCCGGTTG CGGCTCGCAG CCCTGCTGCA CGACGCCCCC
GAATACGTGA TCGGCGACAT GATCTCGCCG TTCAAGGCGG TGATCGGCGA ATCCTACAAG
GCGGTCGAGC GACGGCTGCT GGCCGCGATC CACATCCGGT TCGGGCTGCC GGCGGCGCTC
GACGAGGCGA TCGAACGCCA GATCAAGGCC GCCGACCGCG GCGCCGCCTT TCTCGAGGCG
ACCCACCTCG CCGGCTTCAC CAAGTCCGAA GCCAAGCGGC TGTTCGGCAG CGATCCCGGG
CTGCCGCCGG CGATGATCGA CGATTATCTG ACGCCCTGGT CGGCCGGAAA GGCGGAGAAG
CGGTTGCTGG CCCGCTTTCA GGCGCTGTAC GGCTAG
 
Protein sequence
MTSAAKTSST APRTSQASAR VWQRMLSGRR LDLLDPSPLD VEIADIAHGL ARVARWNGQT 
SGAHIFSVAQ HTLLVEAVMR EKSPRVDARL RLAALLHDAP EYVIGDMISP FKAVIGESYK
AVERRLLAAI HIRFGLPAAL DEAIERQIKA ADRGAAFLEA THLAGFTKSE AKRLFGSDPG
LPPAMIDDYL TPWSAGKAEK RLLARFQALY G