Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1114 |
Symbol | |
ID | 3910200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1284381 |
End bp | 1285016 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883007 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_484735 |
Protein GI | 86748239 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.289727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.182535 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTG CCGCCAAAAC CTCCAGCACC GCTCCCAGGA CATCGCAAGC CTCCGCCCGG GTCTGGCAGC GGATGCTGTC CGGCCGCCGG CTTGATTTGC TCGATCCGTC GCCGCTGGAT GTCGAAATCG CCGATATTGC CCACGGTCTG GCGCGGGTCG CGCGCTGGAA CGGCCAGACC AGCGGTGCGC ACATCTTCTC GGTGGCGCAG CATACGCTGC TGGTCGAGGC GGTGATGCGC GAGAAGAGCC CCCGGGTCGA CGCCCGGTTG CGGCTCGCAG CCCTGCTGCA CGACGCCCCC GAATACGTGA TCGGCGACAT GATCTCGCCG TTCAAGGCGG TGATCGGCGA ATCCTACAAG GCGGTCGAGC GACGGCTGCT GGCCGCGATC CACATCCGGT TCGGGCTGCC GGCGGCGCTC GACGAGGCGA TCGAACGCCA GATCAAGGCC GCCGACCGCG GCGCCGCCTT TCTCGAGGCG ACCCACCTCG CCGGCTTCAC CAAGTCCGAA GCCAAGCGGC TGTTCGGCAG CGATCCCGGG CTGCCGCCGG CGATGATCGA CGATTATCTG ACGCCCTGGT CGGCCGGAAA GGCGGAGAAG CGGTTGCTGG CCCGCTTTCA GGCGCTGTAC GGCTAG
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Protein sequence | MTSAAKTSST APRTSQASAR VWQRMLSGRR LDLLDPSPLD VEIADIAHGL ARVARWNGQT SGAHIFSVAQ HTLLVEAVMR EKSPRVDARL RLAALLHDAP EYVIGDMISP FKAVIGESYK AVERRLLAAI HIRFGLPAAL DEAIERQIKA ADRGAAFLEA THLAGFTKSE AKRLFGSDPG LPPAMIDDYL TPWSAGKAEK RLLARFQALY G
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