| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1111 |
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| Symbol | |
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| ID | 3910197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1279979 |
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| End bp | 1282684 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637883004 |
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| Product | hypothetical protein |
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| Protein accession | YP_484732 |
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| Protein GI | 86748236 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.661792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.626609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAC TGCTGACGCT CGTGATCGCC CTCGTCGCGC TGGTGCTGGC GCGCAAGGCG
AACAACCGCT CCCAGGAATT GCAGGCGAGG CTCGCCGCGC TCGAAGCGGG ACAGCCGCTG
ACGGCGCGTG CGCAGCCCGC GGCGACCGCG GCGAGTGGTA GCGCCGTCGC GGAGGCATCG
CTCGCACCCG AGCTTCAGCC GGAAGTCGCC GAGGCGGGGG CGGCCGAGGC GGCGACGGAA
TCGGCATCCG CCGGGAGCGC CGCGTCGGCA GACGCATCGA TCGATACGTC CGCGCCGGCC
GAACCGCCGG CTGCACCATC AGCCAAGCCC GGCTTCGAAG AGCGCATCGG CACCCGCTGG
GTGGTGTGGG TCGGCGGGCT GACGCTGGCG CTCGGCGGCT TCTTCATGGT GCGTTACTCG
ATCGAACAGG GTCTGCTCGG CCCCGGCGTG CGCGTGTTGC TCGGCGGCCT GTTCGCACTG
GCGCTGCTCG GCGCCGGTGA ATGGACGCGA CGCAAGGAGG ACATCTCGAA CCTGCGCGCG
CTGCCGATCG CCAACATCCC CGCGATCCTC ACCGCGGCTG GCACCGCCGT GGCATTCGCG
ACCGTCTACG CATCCTATGC CCTGTACGAC TTTCTCGCTC CCGCCAGCGC CTTCATATTG
CTCGGGCTGG TCGCGCTCGG CACGCTGGCT GCGGCGTTGC TGCACGGCCC GGCGCTGGCA
GGGCTCGGCG TCGTCGCCGG CTTCGTCACG CCGCTGCTGG TGTCGTCGGA GACGCCCGAC
TATTGGGCGC TGTACATCTA TCTCGCGGTG GTGACCGCGG CGTCGTACGG CCTCGCGCGA
ATCCGGCTGT GGCGCTGGCT CGCCATGACC ACGATCGCGC TGGCGTTCCT CTGGGCGGTG
GCCGGACTCG CAGGAGCGTC GCTGGGGCCG CTCGCGTTCC ACGTCATCGC CGGCTTCGTG
CTCGCCGCAC TGCTCGTTGT CTGCAACTTG CTGTTCGGCC CGTCGCTCGA GGACGGCCGA
ATCGAGACGA TCTCGTCCGC CTCGCTCGCC GCGCCCGTGC TCGCGGCCGC GCTGATCGTC
GTCGGCGAGG GCCATACCGA CTCGGCGATG ATCGTGTTCG CGCTGCTGGT CGCGGCGACG
CTCGGCGTGG CGTGGCGCGC AGCGGCGGCG ACTGCGGCCG TCGGCGCCGC CGCGGTGCTG
GTCGCGCTGG TGTTTCTCTC GTGGGTGATC CGCAGCGCGC CCGAATTACT TGCGTTGCCC
GGCGGACCGC TGCCCGGAAT CGGCACCGAT CCGCTTGCCG GCTCGGTGAC GACACACCTG
ATCACGGCTG CGATCTTTGC GCTCGGCTTC GGCGTCGCCG GGCTGCTGGC ACAGGGGCGA
TCGACCAGTG CGATCGTCCC GGTGATCTGG TCGGCTGCGG GGGTGTTCAC GCCGCTGGCG
TTGCTGATCG CGCTGTATGC GCGGATCGCC CATCTCGATC GCTCGATCCC GTTTGCCATT
GTCGCGGTAC TCCTCGCCGC GGCTTACGGC GCCGCCACCG AATGGCTGAG CAAGCGCGAG
ACCCGGCCCG GGCTCGCGAT CTCGGCGGCG CTGTACGCCA CCGGCACGCT CGGCGCGCTG
GCGCTGGCGC TGACCTTCGC GTTGGAGAAG GGCTGGCTGA CGATCGCGCT GGCGCTGATG
GCGGCCGGCA CGGCCTGGAT CTCGCTGCAG CGGCCGATTC CGTTCCTGCG CTGGCTCGCC
GCGATCCTCG CTGGCATCGT CGTGCTGCGA GCCGGCTGGG AGCCGCGCAT CGTCGGAGAC
GCGATCGGCA CCACGCCGAT CTTCAACTGG CTGCTGTGGG GCTATGGCGT GCCGGCGGCA
TCGTTCTGGC TCGCCAGCTT CTGGCTTCGC AAGCGCGGCG ACGACGTGCC GCTGCGCATG
ATGGAGTCCG CAGCGATCCT GTTCACCGTG CTGCTGGCAT TCCTGCAGAT CCGCCACGCC
GTCAACAACG GCGATGTCTA TCGCGACAGC GCCGGGCTGG TCGAGGTCGC CCTGCAGGTC
TGCGTCGCGC TGGCGATGGC GATCGGCCTC GAACGGCTGC GGCGACGCAG CCGCAGCGTC
GTTCACAACG TCGCGGCGAT CCTGCTCGCG GTGTTCGCCG CACTCGCCAG CATCGGCGGC
CTGCTGCTGT TCGAAAATCC TCTGTTGTGG TGGTCCGGCG AAATCGGCGG CCTGCTGCTG
AACGAGCTGC TGCTCGGCTA TGCGGCTCCG GCGCTGCTGG CGCTGCTGCT GTCCTACGCG
GTCGCGGGGC TGCGCCGACC GTCCTATGCC AACAGCTTCG CGGCGCTCGC GCTGATGATG
GGGCTGGCCT ATGTGACGCT GGAAATCCGT CGGCTGTATC ACGGCCCCGT GCTGTGGCGC
GGCCTCACCA CCGATGCCGA GCAGTACACC TATTCGCTGG CCTGGCTCGG CTGCGGCGTG
CTGCTGCTCG GCGCCGGCAT CCTGTTCAAC TCGCAGCGCG CCCGGCTCGC CTCCGCGGTG
GTGATCGGCC TCACCATCGT CAAAGCCTTC CTGATCGACA TGTCGACGCT GACCGGCGTG
TACCGGGCGC TGTCGTTCAT GGGGCTCGGC CTGGTGCTGG TCGCGATCGG CTGGCTGTAT
CAGCGCGTCT TGTTTCGGCC GCGTGCTCTG CCATCCGGTG CAGCGGCCAG CGACGCGAAG
GATTAG
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| Protein sequence | MFELLTLVIA LVALVLARKA NNRSQELQAR LAALEAGQPL TARAQPAATA ASGSAVAEAS
LAPELQPEVA EAGAAEAATE SASAGSAASA DASIDTSAPA EPPAAPSAKP GFEERIGTRW
VVWVGGLTLA LGGFFMVRYS IEQGLLGPGV RVLLGGLFAL ALLGAGEWTR RKEDISNLRA
LPIANIPAIL TAAGTAVAFA TVYASYALYD FLAPASAFIL LGLVALGTLA AALLHGPALA
GLGVVAGFVT PLLVSSETPD YWALYIYLAV VTAASYGLAR IRLWRWLAMT TIALAFLWAV
AGLAGASLGP LAFHVIAGFV LAALLVVCNL LFGPSLEDGR IETISSASLA APVLAAALIV
VGEGHTDSAM IVFALLVAAT LGVAWRAAAA TAAVGAAAVL VALVFLSWVI RSAPELLALP
GGPLPGIGTD PLAGSVTTHL ITAAIFALGF GVAGLLAQGR STSAIVPVIW SAAGVFTPLA
LLIALYARIA HLDRSIPFAI VAVLLAAAYG AATEWLSKRE TRPGLAISAA LYATGTLGAL
ALALTFALEK GWLTIALALM AAGTAWISLQ RPIPFLRWLA AILAGIVVLR AGWEPRIVGD
AIGTTPIFNW LLWGYGVPAA SFWLASFWLR KRGDDVPLRM MESAAILFTV LLAFLQIRHA
VNNGDVYRDS AGLVEVALQV CVALAMAIGL ERLRRRSRSV VHNVAAILLA VFAALASIGG
LLLFENPLLW WSGEIGGLLL NELLLGYAAP ALLALLLSYA VAGLRRPSYA NSFAALALMM
GLAYVTLEIR RLYHGPVLWR GLTTDAEQYT YSLAWLGCGV LLLGAGILFN SQRARLASAV
VIGLTIVKAF LIDMSTLTGV YRALSFMGLG LVLVAIGWLY QRVLFRPRAL PSGAAASDAK
D
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