| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1103 |
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| Symbol | |
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| ID | 3910189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1266517 |
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| End bp | 1269672 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637882996 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_484724 |
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| Protein GI | 86748228 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.953555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCC GTCTGATCGC CTGGTCGGCA CGCAATCTGC TGCTGGTGCT GTTCGGCGCC
GGCTTCGCCG CCGCGGCCGG AGTCTATGCG CTGAAACACC TGCCGCTCGA TGCGATTCCG
GATCTCTCCG ACACGCAGGT GATCGTCTAC ACCGAAGTTC CCGGTCAGGC GCCGCAAGTG
ATCGAGGATC AGGTCACCTA TCCGCTGACC ACCGCGATGC TGACGGTGCC GCGCTCGAAA
GTGGTGCGCG GCTTTTCGTT CTTCGGCGTG TCGTTCGTCT ACGTCATCTT CGAGGACGGC
ACCGACATCT ACTGGGCGCG CTCGCGCGTG CTGGAATTTC TCAACGGCGC GTCGTCCCGG
CTGCCGGCGG GTGTGACGCC GACCATCGGC CCCGACGCCA CCGGGGTCGG CTGGGTCTAC
CAATATGCGG TGATGTCGAA GGAGCTGAAT CTCGGCGACA CCCGCGCGAT CCAGGATTGG
AATCTGAAAT TCGCGCTGGC CAAGGCCGAA GGCGTCGCCG AGGTCGCCAG CGTCGGCGGC
TTCGTCCGGC AGTACAATGT CGTGCTCGAT CCGCAACGGA TGCGTGACCT CGGCATCACC
ATGCCCAAGA TCCGCGATGC GATCCGCGCC AGTAATGCCG ACGTCGGCGG GCGCACCGTC
GAATTGTCGG AGTTCGAATA CGTCGTTCGC GGCAAGGGCT ATCTCAAGGG CATCAACGAT
CTCGGCGACA TCGTACTGAA GAGCGCGGGC GGCACGCCGG TACTGCTGCG CGATGTCGCC
CGCGTCGAAC TCGGCCCCGA CGAGCGGCGC GGCATCACCG AACTCAACGG CGAGGGCGAG
GTCGCCGGCG GCATCGTGCT GCAGCGTTTC GGCGTCAACG CGCTGAGCGT GATCGACAAC
GTCAAGAAGC GCTTCCGCGA AATCGCCTCC AGCCTGCCCG CCGGCGTCGA AATCGTCGCG
GTTTACGACC GCTCCAATCT GATCGACGCC GCCATCGCCA CGCTGAAGCG CACGCTGGTC
GAGGAGAGCA TCGTGGTGGC GCTGGTCTGC ATCGTGTTCT TGTTCCATGT GCGCAGCGCG
CTGGTCGCGA TCATCATGCT GCCTGTCGGC ATCCTGATGG CGTTCGTTGC GATGAAGCTG
CTCGGCATCG GCGCCAACAT CATGAGTCTG GGGGGAATCG CGATCGCGAT CGGTGCGATG
ATCGATGCGG CGATCGTGAT GATCGAGAAC GCTCACAAAC ATCTGGAGCG CGCCGCTCCT
GGCCGCGCGC GGGTCGAGGT GTTGATCGAA GCTGCCGCCG AAGTCGGTCC GGCGCTGTTC
TTCAGTTTGC TGATCATCAC CGTGTCGTTC ATGCCGATCT TCACGCTGGA ATCGCAGGAG
GGCCGGCTGT TCAGTCCACT GGCTTTCACC AAGACGTTCG CGATGGCCGC CGCAGCGCTG
CTGTCGGTCA CGCTGGTGCC GGCGCTGATG GTGGTCTTCG TCCGCGGCAG AATCGTTCCG
GAACGCAAAA ACCCGATCAG CCGGCTGTTG ATCTGGATCT ATCGCCCGGT GATCAAAGCG
GTGCTGAGCG CCAAGCTGAT CGTGATCCTC GCCGCGGTGG CGATTCTCGC CGTCACAGTC
TGGCCGGCGC GGCAGCTCGG AACCGAATTC ATGCCGAGCC TCAACGAAGG CACGCTACTC
TTTATGCCGA CGACGTTGCC CGGCATCTCG GTGACCAAGG CCGCCGAACT GCTGCAGACG
CAGGACCGGA TCATCCATTC CTTCCCCGAA GTCGCGTCGG TGTATGGCAA GGCCGGCCGC
TCCGCGACCG CGACCGATCC GGCACCGTCT GAAATGTTCG AGACCATCAT CAACCTGAAG
CCGAAGCAGC GATGGCGTGC CGGTGTGACG ATCGAGAGCC TTACGGCCGA GATGGATCGT
GCATTGCAGT TCCCCGGCGT CTCCAATGCC TGGACGATGC CGATCAAGTC GCGGATCGAC
ATGCTGTCGA CCGGCATCCG CACCCCGGTG GGCGTCAAGG TGATCGGGCA CGATCTCGGC
GAGATCGAAA GCTTGGCGAA GCAGATCGAA CAGGTGTTGA AGACGGTGCC CGGCACGTCG
TCGGCCTATG CGGAGCGCGC GCTCGGTGGC TACTATCTCG ATATCACCCC CGATCGTGCG
GCGCTGGCGC GCTACGGCAT CAGCATCCAG GATGTCCAGG ATGTGATTGC CACCGCGCTC
GGCGGCCAGA CCGTGACGAC GACGGTGGAA GGTCGCCAGC GCTTCGGCGT CAACATGCGC
TATCCGCGCG ATCTGCGCAG CTCGGCGCAG GCGATTGCGA GCGACGTGCT GGTGTCGATG
CCGACCGGCG GCGCTGTGCC GCTCGGTGAA ATCGCCACCG TTACGCCGAC GCGCGGCCCG
ACCTCGATTC GCACCGAGAA CGGCCAGCTC GCGGTCTACA TCTATGTCGA TATCCGCGAC
CGCGATCTCG GCGGCTACGT CTCCGACGCT CAGCGGGCGG TGACGGCCGG CATCGCTTTT
CCGACCGGGT CCTATGTGGT CTGGAGCGGG CAGTACGAAT ATCTCGAACG CGCCGCGGCG
CGCTTGAAGG TCGTGGTACC GGTGACGTTG CTGATCATCT TCCTGCTGCT GTATCTGAAT
TTCCGCTCGA TCACCGAAAC CATGATCGTG ATGCTGTCGC TGCCCTTCGC GCTGGTCGGC
GGCATCTGGC TGATGTGGGC GCTCGGCTTC AACCTGTCGG TCGCCGTGGT GGTCGGCTTC
ATCGCGCTCG CCGGCGTTGC GGCAGAGACC GGCGTGGTGA TGCTGATCTA TCTCGATCAC
GCGATGGCTG AGGTCGCATC GCGTCGCGCC GCCGCCGGTG CGTCGCTCGA CCACGGCGAT
ATTGCCGAGG CGATCATCCA CGGCGCGGTC GAGAGGGTGC GGCCGAAGAT GATGACGGTG
GTGGCGATCA TGGCCGGCCT GTTGCCGATC CTATGGAGCA CGGGAACCGG TTCGGAGATC
ATGCAGCGCA TCGCGGTGCC GATGATCGGT GGGATGATCT CGTCGACGCT GCTGACGCTG
GTTGTGATCC CCGCGATCTA CGCGCTGGTC AAGGGTTTCA ACCTGCGCGG ATCGAGTGCG
GTCGCCGCGC CGCTTCCGAC CGATGACGCC GGCTGA
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| Protein sequence | MIARLIAWSA RNLLLVLFGA GFAAAAGVYA LKHLPLDAIP DLSDTQVIVY TEVPGQAPQV
IEDQVTYPLT TAMLTVPRSK VVRGFSFFGV SFVYVIFEDG TDIYWARSRV LEFLNGASSR
LPAGVTPTIG PDATGVGWVY QYAVMSKELN LGDTRAIQDW NLKFALAKAE GVAEVASVGG
FVRQYNVVLD PQRMRDLGIT MPKIRDAIRA SNADVGGRTV ELSEFEYVVR GKGYLKGIND
LGDIVLKSAG GTPVLLRDVA RVELGPDERR GITELNGEGE VAGGIVLQRF GVNALSVIDN
VKKRFREIAS SLPAGVEIVA VYDRSNLIDA AIATLKRTLV EESIVVALVC IVFLFHVRSA
LVAIIMLPVG ILMAFVAMKL LGIGANIMSL GGIAIAIGAM IDAAIVMIEN AHKHLERAAP
GRARVEVLIE AAAEVGPALF FSLLIITVSF MPIFTLESQE GRLFSPLAFT KTFAMAAAAL
LSVTLVPALM VVFVRGRIVP ERKNPISRLL IWIYRPVIKA VLSAKLIVIL AAVAILAVTV
WPARQLGTEF MPSLNEGTLL FMPTTLPGIS VTKAAELLQT QDRIIHSFPE VASVYGKAGR
SATATDPAPS EMFETIINLK PKQRWRAGVT IESLTAEMDR ALQFPGVSNA WTMPIKSRID
MLSTGIRTPV GVKVIGHDLG EIESLAKQIE QVLKTVPGTS SAYAERALGG YYLDITPDRA
ALARYGISIQ DVQDVIATAL GGQTVTTTVE GRQRFGVNMR YPRDLRSSAQ AIASDVLVSM
PTGGAVPLGE IATVTPTRGP TSIRTENGQL AVYIYVDIRD RDLGGYVSDA QRAVTAGIAF
PTGSYVVWSG QYEYLERAAA RLKVVVPVTL LIIFLLLYLN FRSITETMIV MLSLPFALVG
GIWLMWALGF NLSVAVVVGF IALAGVAAET GVVMLIYLDH AMAEVASRRA AAGASLDHGD
IAEAIIHGAV ERVRPKMMTV VAIMAGLLPI LWSTGTGSEI MQRIAVPMIG GMISSTLLTL
VVIPAIYALV KGFNLRGSSA VAAPLPTDDA G
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