Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1097 |
Symbol | |
ID | 3910183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1258733 |
End bp | 1260013 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882990 |
Product | hypothetical protein |
Protein accession | YP_484718 |
Protein GI | 86748222 |
COG category | [S] Function unknown |
COG ID | [COG3174] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.122525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.979079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCGA CGCCGTCTGT TCATAGTCTC GGCCTGCTGC TGCTGTTGAG TTTTTTTCTC GGCTTCGCGT TCGAGGATTT CTTCGCGAAG ACCAGCTCCG CACGGCCGGG CGGCATCCGC ACCTTCCCGC TGCTCTCGCT CGGCGGCGGC ATCCTTTATC TGTTCGATCC GACACACCTG ATCGCCTTCA CTGGCGGACT GCTCGTGCTC GGCGCCTGGC TGGCGATGTT CTACGGCGTC CATCTGCGCG AGCGCGACGA GAAAGGCGAG CGCAATGCCG GGCTGGTGGT GCTGCTGCTG AACGTGCACG CCTATCTGCT CGGCGCGGTC GCGCTGGCGC TGCCGCATTG GATCGCGGTC GGCGTCACCG TGGTCGCGGT GCTGCTGCTG ACCGGGCGCG ACCGGCTGCA CACGCTGGCG CGCCGCATCG ACATGAAGGA AATCACCACG GCCGGTCAGT TCCTGATTCT GACCGGTGTG GTGCTGCCGC TGCTGCCGGC CGAGCCGGTG ACGACCCTCA CCAGCATCAC GCCGCGGCAG GCCTGGCTGG CGCTGACGCT GGTCTGCACC CTGTCCTATG CGAGCTATCT GGCGCAGCGC TACTGGCCGC GGGCGGCGCG CGGGCTGTGG ATGCCGGCGC TGGGCGGGCT GTATTCGTCG ACGGCCACCA CCGTGGTGCT GGCGCGGCAG GCGAATGCCG ACCCGGCCTC GCGACGGCAG GCGCTGGCCG GGATCACGCT CGCCACCGGC ATCATGTATC TGCGCATTCT GGCGATCATC GCGGTGTTCA ATCTGGCGCT GGCGCGCCAG CTCGTGGTGC CGATGGCCGG CCTCGCCGCC TTGGCGCTGT CGATCGCCGC GCTGCAATAC TGGCTGATCA AGGCGCCGGC CGCCGAAGCG CATGACGCAG CGGGGCGCGG CAACCCGCTC GAACTCGGCA CCGCCGCGGC GTTCGCGGCG ATGTTCGTGC TGATCTCGCT GGCCTCGACC TGGGTGAAGA CGGAATTCGG CACCGAAGGC ATCTATTGGC TGGCGGCGAT CGTCGGCTTT GCCGACATCG ATCCCTTCGT CCTCAATCTG GCGCAGGGCG GCACCGCCGG GATCGGCGAC CACGCGGTCG CGATCGCGGT GCTGATCGCG GCGTCGTCCA ACAACATCCT GAAGGCGACC TACGCGCTGT CGTTCGGCGG CCGCGCGACG CTGCAGAGCG CGCTGATGCT GGTGATACTG GCCGGGATCG GCGTCGTGCT CGCTGTGCTG CTCGCGCGCG GGACGCTCTG A
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Protein sequence | MIATPSVHSL GLLLLLSFFL GFAFEDFFAK TSSARPGGIR TFPLLSLGGG ILYLFDPTHL IAFTGGLLVL GAWLAMFYGV HLRERDEKGE RNAGLVVLLL NVHAYLLGAV ALALPHWIAV GVTVVAVLLL TGRDRLHTLA RRIDMKEITT AGQFLILTGV VLPLLPAEPV TTLTSITPRQ AWLALTLVCT LSYASYLAQR YWPRAARGLW MPALGGLYSS TATTVVLARQ ANADPASRRQ ALAGITLATG IMYLRILAII AVFNLALARQ LVVPMAGLAA LALSIAALQY WLIKAPAAEA HDAAGRGNPL ELGTAAAFAA MFVLISLAST WVKTEFGTEG IYWLAAIVGF ADIDPFVLNL AQGGTAGIGD HAVAIAVLIA ASSNNILKAT YALSFGGRAT LQSALMLVIL AGIGVVLAVL LARGTL
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