| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1084 |
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| Symbol | |
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| ID | 3910170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1244078 |
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| End bp | 1245736 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882977 |
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| Product | electron-transferring-flavoprotein dehydrogenase |
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| Protein accession | YP_484705 |
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| Protein GI | 86748209 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.29604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG AAACGCTGCC CCCCCGCGAA TCGATGGAAT TCGACGTTGT GATCGTGGGC
GCGGGACCCT CGGGACTGGC TTCCGCCATC CACCTGAAAC AGATCAACCC CGAACTGTCG
GTGGTCGTGG TCGAGAAAGG CTCCGAGGTC GGCGCGCACA TCCTCTCCGG GGCGGTGATC
GACGTCAGCG CGCTCGACAA GCTGATGCCG GGCTGGCGTG AGGACGAGAC CTGTCCGCTC
AAGACCCATG TCGAGGACGA TCATTTCTAC GTCATGACGG CGGACAAGGC CTACAAGGTC
CCGGGCATCA TGGTCCCGCC GATGCTCAAC AACCACAAGA ACTTCATCGG GTCGCTCGGC
GATCTGTGCC GCTGGCTCGG CCCCAAGGCC GAAGAACTCG GCGTCGAAAT CTATCCCGGC
TTCGCCGCCA CCGAAGTGCT GTACGGCGAC AACGGCGAAG TGCGCGGCAT CGCCACCGGC
GACATGGGCA TCGGCCGCGA CGGTCAGCCC AAGGATTCGT TCACGCGCGG CATGGAGCTA
CTGGGCAAGT ACACGCTGTT CGCCGAGGGC GCGCGCGGCA GCCTGGCGAA GCAGCTGATC
GCCAAGTACA AGCTCGACAA GGACAGCGAC CCGCCGAAAT TCGGCATCGG CCTGAAGGAA
GTCTGGGAGA TCGATCCGGC GAAACACCGC AAGGGCCGGA TCGCGCATTC GTTCGGCTGG
CCGCTCAGCA ACAATATCGG CGGCGGCTCG TTTCTTTATC ACTACGGCAC CAACCTCGTC
GCGGTCGGCT TCGTCGTGCA TCTCAACTAC GACGATCCTT ATCTGTCGCC GTTCGAGCAG
TTCCAGAAAT TCAAGACGCA TCGCTCGGTG GCGCCGACCT TCGAGGGCGG CAAGCGGATT
TCCTACGGCG CGCGCGCCAT CACCGAAGGC GGCTGGCAGT CGGTGCCGCG GCTGACCTTC
CCCGGCGGCG CGCTTGTCGG CTGCGCCGCG GGCTTCGTCA ACGTGCCGCG CATCAAGGGC
GTGCACAACG CGATCGGCAG CGGCATGCTC GCCGCCGAGC ACGTTGCCGC CGCACTCGCC
GCGGGGCGCA GCAACGACGA GGTCAAGAGC TACGAGGAAT CGTGGCGCGA CTCCGCGATC
GGCCGCGACC TGTTCAGGAT CCGCAACGTC AAGCCGCTGT GGTCGAGGTT CGGCACCGCG
GTCGGCGTGG TGCTGGCCGG ATTCGAGATG TGGTGTTCGA CTCTCGGCTT CTCGGTGTTC
GGCACCCTGT CGCACGGCAA GCCGGACCGC TCGACGCTCG ATCCCGCCAA GTCGCACGAG
CGGCATCCGG CCGCGAAGCC GGACGGCAAG CTGACCTTCG ACCGGCTGTC CTCGGTGTTC
CTGTCGAACA CCAATCACGA GGAAGACCAG CCGGTGCATC TGAAGGTCGC CGACATGGCC
CTGCAGAAGA CGTCGGAGCA CGACGTCTTC GCCGGACCGT CGGGGCGCTA TTGCCCGGCG
GCGGTGTACG AATGGGTCGA GGAGCCGTCG GGTCCGCGCT TCGTGATCAA CGCGCAGAAC
TGCGTCCACT GCAAAACCTG CGACATCAAG GATCCGAACG GCAACATCAC CTGGGTGCCT
CCGGAAGGCG GCGGCGGCCC GAATTATCAG GGCATGTAA
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| Protein sequence | MSDETLPPRE SMEFDVVIVG AGPSGLASAI HLKQINPELS VVVVEKGSEV GAHILSGAVI
DVSALDKLMP GWREDETCPL KTHVEDDHFY VMTADKAYKV PGIMVPPMLN NHKNFIGSLG
DLCRWLGPKA EELGVEIYPG FAATEVLYGD NGEVRGIATG DMGIGRDGQP KDSFTRGMEL
LGKYTLFAEG ARGSLAKQLI AKYKLDKDSD PPKFGIGLKE VWEIDPAKHR KGRIAHSFGW
PLSNNIGGGS FLYHYGTNLV AVGFVVHLNY DDPYLSPFEQ FQKFKTHRSV APTFEGGKRI
SYGARAITEG GWQSVPRLTF PGGALVGCAA GFVNVPRIKG VHNAIGSGML AAEHVAAALA
AGRSNDEVKS YEESWRDSAI GRDLFRIRNV KPLWSRFGTA VGVVLAGFEM WCSTLGFSVF
GTLSHGKPDR STLDPAKSHE RHPAAKPDGK LTFDRLSSVF LSNTNHEEDQ PVHLKVADMA
LQKTSEHDVF AGPSGRYCPA AVYEWVEEPS GPRFVINAQN CVHCKTCDIK DPNGNITWVP
PEGGGGPNYQ GM
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