Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1076 |
Symbol | |
ID | 3908928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1235748 |
End bp | 1236566 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637882969 |
Product | coenzyme A transferase |
Protein accession | YP_484697 |
Protein GI | 86748201 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.616034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGAGAGA TCGTTTCGCT GCAGCAACTG GCCGCGCAGG TGCGCGACGG CATGACGGTG GCGCTGTCGT CCGACAATGC CGGCGTCGCG ATGGCCGCCA CCGCCGCCAT CCTCGCCAAC CGCCCGAAAA ATCTGCACCT CGTTTGCGTT CCGATCAGCG GCATGCAGGC CGACATGCTG ATCGGCGAGG GGCTGGTCGG CACGCTCGAG ACCAGCGCGG TGACGCTGGG TGAAGCCGGC GGCGCGCCGC GATTCGCCGA CGGGATTCGC AACGGCGCGT TCAAGATGAT GGATGCGACC TGCCCGGCGA TTCTCGCCGG CCTCGTCGCC GGTCAGAAGG GCGTGCCGTT CATGCCGATC CGCGGCATCA TCGGCAGCGA CCTGCTGGCC TCGCGGCCGG ACTGGAAGGT GATCGACAAT CCGTTCGCTG AGAACGACCC GATCGTCGTG GTGTCGGCGA TCCGGCCCGA CATCGCGCTG TTTCACGCCC CCGAGGCCGA TCGCTTCGGC AATGTCCGGA TCGGACGGCA GACCGAGCTC GCGGCGATGG CCTATGCGGC CAAGACCACG CTGGTGACGG TCGAGCGCAT CGTCGAGACC TCGCTGCTCG CCGACGAACG CTCTGCGGCG GGCGTGTTGC CGGCGCTGTA TGTCGGCGCG ATCGCCGAGG CGAAGCACGG CGCCTGGCCG CTGGGCCTCG CCGGTGAATA CGTCACCGAC TCGGCCGAAG TCGCACGCTA CGCCAAGATG GCGCGCTCGG CCGACGGCTT CGCGGCCTAC ATGAAGGGCT TCGCGCAGGC ATTCGAGGCG GTGGCATGA
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Protein sequence | MGEIVSLQQL AAQVRDGMTV ALSSDNAGVA MAATAAILAN RPKNLHLVCV PISGMQADML IGEGLVGTLE TSAVTLGEAG GAPRFADGIR NGAFKMMDAT CPAILAGLVA GQKGVPFMPI RGIIGSDLLA SRPDWKVIDN PFAENDPIVV VSAIRPDIAL FHAPEADRFG NVRIGRQTEL AAMAYAAKTT LVTVERIVET SLLADERSAA GVLPALYVGA IAEAKHGAWP LGLAGEYVTD SAEVARYAKM ARSADGFAAY MKGFAQAFEA VA
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