Gene RPB_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1075 
Symbol 
ID3908927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1235091 
End bp1235639 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content68% 
IMG OID637882968 
Productmolybdopterin binding protein 
Protein accessionYP_484696 
Protein GI86748200 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0521] Molybdopterin biosynthesis enzymes 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain
[TIGR02667] molybdenum cofactor biosynthesis protein B, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.933861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCT CCGAACAGCC GAAGACTTTC ATCCCGCTCA ACATCGCGGT GCTCACCGTG 
TCCGATACGC GTTCGCTCGA CGACGACAAG TCGGGCGCGA CGCTGGTCGA GCGGCTGACG
GCGGCGGGAC ACCATCTCGC GGCGCGGGAG ATCGTGAAGG ACGATATCGC GGCGATTCGC
GATGTCGTGC GGCGCTGGAT CGCCGACGAT GGCGTCGACG CGATCATCAC CACCGGCGGC
ACCGGCTTCA CCGGCCGCGA CGTCACGCCG GAGGCGATCG AGCCGCTGTT CGAAAAGCGC
ATGGACGGCT TCTCGATCGC GTTCCACATG ATGAGCTACG CCAAGATCGG CACCTCGACG
ATCCAGTCGC GCGCCACCGC CGGCGTCGCC GGCGCGACCT ACCTCTTCTG CCTGCCGGGC
TCGCCCGGCG CCTGCCGCGA CGGCTGGGAC GGCATTCTGG CCGCACAGCT CGATTACCGC
ACCCGGCCGT GCAACTTCGT CGAGATCATG CCGCGACTCG ACGAACACCT GCGCCGCGAC
AAGGCCTAA
 
Protein sequence
MASSEQPKTF IPLNIAVLTV SDTRSLDDDK SGATLVERLT AAGHHLAARE IVKDDIAAIR 
DVVRRWIADD GVDAIITTGG TGFTGRDVTP EAIEPLFEKR MDGFSIAFHM MSYAKIGTST
IQSRATAGVA GATYLFCLPG SPGACRDGWD GILAAQLDYR TRPCNFVEIM PRLDEHLRRD
KA