| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1063 |
|---|
| Symbol | |
|---|
| ID | 3908915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1217803 |
|---|
| End bp | 1219749 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637882956 |
|---|
| Product | Beta-lactamase-like |
|---|
| Protein accession | YP_484684 |
|---|
| Protein GI | 86748188 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CTGGTCACAA GCCCGATTCA GCACGCGTCG CCAAGGATGC GACCGCGCCG
GTGATCGCGC GGCACGCGAC GGTGCTGAAC GAATTGCCGT TTTCCGACAC GCGGGATTTC
GACGAGGCGC GGCGCGGCTT TCTCGGCACC ATCGACGACG CGATGATTAC GTCGCCGCAG
GGCCGCACGG TGTGGAGCCT GGCGCCTTAC GCATTTCTCG CCGCGGAAAC AGCGCCACCG
AGCGTCGATC CGAGCCTGTG GCGGCAATCG CGGCTCAACA TGAATCACGG CCTGTTCGAG
GTGGTGCCCG GGGTCTATCA GGTGCGCGGC TTCGACATCG CCAACATGAC GCTGATCGAG
GGCGACCGCG GCGTCATCGT GGTCGATACG CTGACCTCGA TCGAGGGCGC GCGCGCGGCG
CTGCAACTTT ATTATCGGCA TCGCGGCGAG CGGCCGGTCA GCGCGGTGAT CTTCACCCAC
ACCCACGCCG ACCATTGGGG CGGCGCGCGC GGTGTGCTCG ACGACGCGGC GCTGTCGCGC
GGCGCCGTGC CGATCATCGC GCCGGACCAG TTCATGGAGC ACGCCGTCTC GGAGAACATC
ATCGCCGGGC CGGCGATGCT GCGGCGCGCG CAGTATCAGT TCGGCCCGCT GCTCGCCAAG
GGCCCGCGCG GCCAGGTCGA TTGCGGGCTC GGCAAGTCGA TGGCGGCGGG CTCGGTGGCG
CTGCTGCGGC CGACCGATCT GATCCGGGCG ACCGGCGACA CGCGGACCAT CGACGGCGTA
ACGCTCGAAT TCCAGATGGC GCCGAATTCA GAGGCGCCGG CCGAGATGCA TTTCTACGTC
CCGCGCTGCA AGCTCCTGAA CCTCGCCGAG AACTGCACGC ACAATTTCCA CAATCTGCTG
CCGTTTCGCG GCGCCGATGT CCGCGACGCG CTGGCGTGGT CGAAATATCT CAGCGAGGCG
CTGCAGCTGT GGGGCGGCAA GGCCGAGGCG ATGTGCGGGC AGCATCACTG GCCGGTGTGG
GGCGCCGAGC GGATCGACAC GATGATCCGG CAACAGCGCG ACCTCTACAA ATTCGCCCAC
GACCAGACGC TGCGGCTGAT CAACCACGGC CTCACCGCCG CCGAGATCGC CGAGACCATC
CGGCTGCCGA AGAGTCTCGA CGGCGCCTGG CACACGCGCG GCTATTACGG CCACATCCGC
CACAATGTGA AGGCGATCTA CCAGAAATAT CTCGGCTGGT ACGACGCCAA CCCGGCCAAT
CTCGATCCGC TGCCGCCGGT CGAGGCCGGC AGGAAGTATG TGGAGTACAT GGGCGGCGCC
GACGCGCTGC TGGCGAAGGC CCGCGCCGAT TTCGCACGCG GCGAATTCCG CTTCGTGGCG
CAGGCGCTGA GCCATCTGGT GTTCGCCGAG CCGGACAACC AGGACGGCCG GCATCTGCTC
GCCGACACCT TCGAACAATT GGGCTATCAG TCCGAGAGCG CGACGTGGCG CAACGCCTAT
CTGTTCGGCG CGCAGGAGCT GCGCGCCGGC ATGCCCAAGG TGCCGGCGCG GCCGCCGATG
CCGCGCGAGA CGCTGGCGGC GCTGAAGACC TCGCAGCTCT GGGACGTGCT CGGCGTCCGG
CTCAACGGAC CGAAGGCCGA AGGCAAGACC ATCGTGCTGA ACTGGACATT CACCGACACC
GCCGAGCGCT GGGTGCTGAC GCTGGAGAAT TGCGCACTGA CCTATCTGGA GGGCGCGGCG
GCGGACAACG CCGATGCCGG CTTCGAATTG CCGCGCGGCG TGCTCGACGA GGTGATCGCC
AAGCAGACCT CGTTCCCCGA GGCGGTGGTG GCCGGCCGGA TCAAGGTCCG CGGCAATCCG
ATGAAGCTCG CCGAACTGAT GGCGCTGATG GACGAGTTCC CGCGGATGTT CGAGATCGTC
GAGCCGAAGC GGACGATCAT GAGCTGA
|
|---|
| Protein sequence | MSDAGHKPDS ARVAKDATAP VIARHATVLN ELPFSDTRDF DEARRGFLGT IDDAMITSPQ
GRTVWSLAPY AFLAAETAPP SVDPSLWRQS RLNMNHGLFE VVPGVYQVRG FDIANMTLIE
GDRGVIVVDT LTSIEGARAA LQLYYRHRGE RPVSAVIFTH THADHWGGAR GVLDDAALSR
GAVPIIAPDQ FMEHAVSENI IAGPAMLRRA QYQFGPLLAK GPRGQVDCGL GKSMAAGSVA
LLRPTDLIRA TGDTRTIDGV TLEFQMAPNS EAPAEMHFYV PRCKLLNLAE NCTHNFHNLL
PFRGADVRDA LAWSKYLSEA LQLWGGKAEA MCGQHHWPVW GAERIDTMIR QQRDLYKFAH
DQTLRLINHG LTAAEIAETI RLPKSLDGAW HTRGYYGHIR HNVKAIYQKY LGWYDANPAN
LDPLPPVEAG RKYVEYMGGA DALLAKARAD FARGEFRFVA QALSHLVFAE PDNQDGRHLL
ADTFEQLGYQ SESATWRNAY LFGAQELRAG MPKVPARPPM PRETLAALKT SQLWDVLGVR
LNGPKAEGKT IVLNWTFTDT AERWVLTLEN CALTYLEGAA ADNADAGFEL PRGVLDEVIA
KQTSFPEAVV AGRIKVRGNP MKLAELMALM DEFPRMFEIV EPKRTIMS
|
|---|
| |