| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1059 |
|---|
| Symbol | |
|---|
| ID | 3908911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1214362 |
|---|
| End bp | 1214949 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637882952 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_484680 |
|---|
| Protein GI | 86748184 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGGGCAC CTGTGCTGGC AGCGGGCGGG ATTGTGTTGC GGCGCGGCGG CGAGCCGCTG
TTCGCCGTCG TCCGCATGCG CAAGCGCAAC GACTGGGTGC TGCCGAAGGG CAAGCTCGAC
GACGGCGAGA CCCCGCGGCA GGCCGCCATG CGCGAGGTGC TGGAAGAGAC CGGGCACCTG
GTCGAGGTCC ACGAATTCAT CGGCACGCTC GCCTGCGAGG CCGGCGGTCG CACCAAAGTG
GTGCATTTCT GGCGGATGGA GGCGGCGCCG GTGCAGACCC ACCCGCTGAT GAAGGACATC
CGCGCGGTCG ACTGGCTGCC GCTTCACCAG GCGGTCGAAC GGTTGACGCG CATCCACGAG
CGGGCTTTTC TCGCCCATGT TGGGCCGCTG GTGCTCGACA CCGCCGCGCG CACCGCGCCG
CCGCTCGCGG CGGCCCAGCA TCGCGCGCCG TTCGACGACC AGCCGCTCGA CGACCAGCCA
CTCGCCGAAC TGACCGTGTC GCCGTCGCTG GCGCTGGAGC AGCCGCACGA TGCGCAGCCC
ACCATGCTGC AGCGCATCCG AAACTGGTGG CGCGGCACGG CGCGGTAG
|
|---|
| Protein sequence | MRAPVLAAGG IVLRRGGEPL FAVVRMRKRN DWVLPKGKLD DGETPRQAAM REVLEETGHL
VEVHEFIGTL ACEAGGRTKV VHFWRMEAAP VQTHPLMKDI RAVDWLPLHQ AVERLTRIHE
RAFLAHVGPL VLDTAARTAP PLAAAQHRAP FDDQPLDDQP LAELTVSPSL ALEQPHDAQP
TMLQRIRNWW RGTAR
|
|---|
| |