Gene RPB_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1049 
Symbol 
ID3908901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1205940 
End bp1206797 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content69% 
IMG OID637882942 
ProductAlpha/beta hydrolase 
Protein accessionYP_484670 
Protein GI86748174 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATC CGGAAAGTCG CTTCTATCGG TCGCACGGGC TGCGGCTGCA TTACGCCGAT 
TGGGGCAACG ACACCGCGCC GCCGCTGCTG CTGATCCACG GCGGCGCCGA CCATGCGCGC
AGCTGGGATC ACCTGGCGCG ATCGCTGCGG GCGGATTTCC ACGTCGTCGC GCCGGATCTG
CGCGGCCACG GCGATTCCGA CTGGACGCTC GGCGGCAGCT ACAGCCTGCC GGAATATGTC
TACGACCTCA CCCGGCTGCC GGCGTTCGAA GGCCGCGGGC CGATCACGAT CGTCGGCCAT
TCGATGGGCG GCATGGTGAG CCTGATCTAT GCCGGCACCT TTCCCGAGCA GGTCGCGCGG
CTGGTCGTGC TCGACGGCGT CACCGTGAGG CCGGATGCGG CGAAGCCGCC GGTGCACGAG
CGCACCCGCA AATGGATCGG CCAGCTCGAA GCGCTCGAGA ACCGCGAGCC GCGGCGCTAT
CGCGACATCG CCGAGGCGGC CGCGCAGATG CAGGCGCACA ACAAGCGGCT GGCGCCGGAG
CTGGCGCTGC ATCTGGCCAC TTACGGCGTG AAGCAGAACG ACGACGGCAG CTACTCCTGG
AAGTTCGATC CGCATCAGCG GGTGATGGCG CCGCACCGGC TGTGGCCGGA CGATCACGTC
GCGCTGTGGG GCCGCATCAC CTGCCCGACG CTGCTGCTGT TCGCCGGCGA GAGTTTTCTC
TCCGATGCGG CCGAAGCGGG GATCGCCGAT CATTTCCCAC AGGCGCGCGC CGAGACCGTC
GCCGGCGCCG GGCACTGGCT GCAGCACGAC AGGCCCGACG AGGTGCTGCG GCTGATCCGC
GACTTCCTGC TCGTGTAG
 
Protein sequence
MQNPESRFYR SHGLRLHYAD WGNDTAPPLL LIHGGADHAR SWDHLARSLR ADFHVVAPDL 
RGHGDSDWTL GGSYSLPEYV YDLTRLPAFE GRGPITIVGH SMGGMVSLIY AGTFPEQVAR
LVVLDGVTVR PDAAKPPVHE RTRKWIGQLE ALENREPRRY RDIAEAAAQM QAHNKRLAPE
LALHLATYGV KQNDDGSYSW KFDPHQRVMA PHRLWPDDHV ALWGRITCPT LLLFAGESFL
SDAAEAGIAD HFPQARAETV AGAGHWLQHD RPDEVLRLIR DFLLV