Gene RPB_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1046 
Symbol 
ID3908898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1203039 
End bp1203965 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content68% 
IMG OID637882939 
Productsulfate ABC transporter, permease protein CysT 
Protein accessionYP_484667 
Protein GI86748171 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCG ACCTCTCCCC GCAGGCGGGG AGAGGTGAGG TTGCGCTCGG CGAACGCTGT 
CGTTCGTCCG GCGCGCCGTC GTGTGCTGCA GTGAGCGCGA TCGCACGACG ACGGTCGTTG
CCGGGCTTCG GCCTCACCAT GGGCCTGACC CTGATGTGGC TGTCGCTGAT GATCCTGATT
CCGCTGGCCG GGCTGTTCGT GAAGACGGCC GAACTCAGCC TCTCCGAATT CTGGGCGACG
GTGACCGCGC CGCGCACGCT GCATGCCTTG AAGATCTCGT TCGGGCTGGC CTTCGCCGCC
GCCTGCGTCA ATCTGGTCGC CGGCCTGCTG ATCGTCTGGG CGCTGGTGCG TTACAGCTTC
CCCGGCCGGC GGATCTTCGA CGCCATCGTC GACATCCCGT TCGCGCTGCC GACCGCGGTC
GCCGGCATCG CGCTGACGAC GCTGTTCGCG CAGAACGGCT GGCTCGGCGC GCCGCTCGCC
GAACTCGGCA TCAAGGTGGC GTTCACGCCG CTCGGGATTT TTCTGGCGAT GGTGTTCATC
GGGATTCCGT TCGTGGTGCG CACCGTGCAG CCGGTGCTGA TCGATCTCGA CGCCGAACTC
GAGGAGGCCG CGGAATCGCT CGGGGCGTCG CGGCTACAGA CCATCCGCCG CGTCATCCTG
CCGTCGCTGA CGCCGGCGGT GATGACCGGC TTCGCGCTCG CCTTCGCCCG CGCGGTCGGC
GAATACGGTT CGGTGATCTT CATCGCCGGC AACCTGCCCA ACGTCTCGGA GATCGCGCCG
CTGCTGATCG TGATCCGGCT GGCGGAGTTC CGCTATGCCG ACGCCACCGC GATCGCGGTG
GTGATGCTGC TCTTCTCCTT CCTGATCATT CTCGTTCTGA ACCGGCTGCA GCATTGGGCG
CAGACCCGGT CGCTGGCGGG AGCGTGA
 
Protein sequence
MRVDLSPQAG RGEVALGERC RSSGAPSCAA VSAIARRRSL PGFGLTMGLT LMWLSLMILI 
PLAGLFVKTA ELSLSEFWAT VTAPRTLHAL KISFGLAFAA ACVNLVAGLL IVWALVRYSF
PGRRIFDAIV DIPFALPTAV AGIALTTLFA QNGWLGAPLA ELGIKVAFTP LGIFLAMVFI
GIPFVVRTVQ PVLIDLDAEL EEAAESLGAS RLQTIRRVIL PSLTPAVMTG FALAFARAVG
EYGSVIFIAG NLPNVSEIAP LLIVIRLAEF RYADATAIAV VMLLFSFLII LVLNRLQHWA
QTRSLAGA