| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1039 |
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| Symbol | |
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| ID | 3909163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1194294 |
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| End bp | 1195124 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882932 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_484660 |
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| Protein GI | 86748164 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.336081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGA TCAAGCGTTA CTTCCGCAGT CCCGCCGCGA TCGTCGGCCT GCTGCTGTTG
CTGGTGGTGA TCGGCATGGC GATCAGCGCC GGCTGGTTCT ACCCGCGCGA TCCGCTGTCG
CTCGCCGGCC GGCCGCTGAT CTGGCCGTTC AGCAATCCGC GCTTTTTGCT CGGCACCGAC
AATTCCGGCC GCGACATCGC CGCGCAGATT TTCCACGGCG CGCGGATCGC GCTGCTGATC
GGCGGCGCGG CGACCGTGAT CGCGGTGGTG ATCGGCGTGC TGATCGGCGC CTTCGCCGGC
TATTTCGGCG GCATCGTCGA CACCGTGCTG ATGCGCATCA CCGAGGCGTT CCAGATCCTG
CCGAACTTCG TTTTATTACT TGTGCTGGTC GCGGTGTTCG GCTCGACGCT GACCACGGTG
ACGATTGCGG TCGGCATCGT GTCGTGGCCG GCGCCGGCGC GGCTGACGCG CGCCGAATTC
CTCAGCTTGC GCAATCGCGA ATTCGTCCAG GCCGGCCGCA CGCTGGGCAT GAAGGATCTG
CAACTGATCC TTGGCGAAAT TCTGCCCAAT GCGCTGCCGC CGGTGATCGT CTATGCCAGC
GTGGTGATGG CGGTGGCGAT CCTGCTGGAG AGCGCGCTGG CGTTTCTGCG GCTGTCCGAT
CCCAACGTCG CCTCCTGGGG CAATCTGATC GGGCTCGGCC GCGACGTGCT GCGCGTGCAA
TGGTACGTCG CCGCGATCCC CGGCATCGCG ATCCTGCTCA CCGTGCTGGC GGTGTCGCTG
GTCGGCCAGG GCCTCAACGA CGCGCTCAAC CCGAGGCTGA AGGGACGATG A
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| Protein sequence | MDAIKRYFRS PAAIVGLLLL LVVIGMAISA GWFYPRDPLS LAGRPLIWPF SNPRFLLGTD
NSGRDIAAQI FHGARIALLI GGAATVIAVV IGVLIGAFAG YFGGIVDTVL MRITEAFQIL
PNFVLLLVLV AVFGSTLTTV TIAVGIVSWP APARLTRAEF LSLRNREFVQ AGRTLGMKDL
QLILGEILPN ALPPVIVYAS VVMAVAILLE SALAFLRLSD PNVASWGNLI GLGRDVLRVQ
WYVAAIPGIA ILLTVLAVSL VGQGLNDALN PRLKGR
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