Gene RPB_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1025 
Symbol 
ID3909149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1176374 
End bp1177135 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID637882918 
Productenoyl-(acyl carrier protein) reductase 
Protein accessionYP_484646 
Protein GI86748150 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGC AAGGTAAAAA GGGACTGGTG GTCGGGATCG CCAATGCGGA GAGCATCGCC 
TTCGGCTGCG CCCGGGCTTT CCGCGACGCC GGCGCAGAGC TGGCCGTCAC CTATCTCAAC
GACAAGGCGA AGCCGCATGT CGGGCCGCTC GCCGAACAGT TGCAAAGCCC GATCGTGCTG
CCCTGCGATG TCCGCGAGCC GGGCCAGCTC GAGGCGGTGT TCGCGCAGAT CGGCGAGACC
TGGGGCCGGC TCGACTTCCT GCTGCATTCG ATCGCCTTCG CCCCGAAGGA GGATCTGCAC
GGAAGGGTGG TGGATTGCTC GCAGGCCGGC TTTGCGATGG CGATGGACGT GTCCTGCCAT
TCCTTCATCC GGATGGCGAA GCTCGCCGAG CCGCTGATGC GGGACGGCGG CTGTCTGTTG
ACGGTCACGT TCTACGGCTC CGAGAAGGTG GTCGAGGACT ACAATCTGAT GGGGCCGGTG
AAGGCCGCGC TGGAAAGCTC GGTGCGCTAC ATGGCGGCCG AACTGGCGGT GAAGCGCATC
CGAGTCCACG CGCTGTCGCC GGGGCCGCTG AAGACCCGCG CCGCCTCCGG CATCGCCCGC
TTCGACGAGT TGATGGAGCG CACCCGCGCC CGCGCCCCGG CGCACCAGCT CGTCGGCATC
GACGACGTCG GCCAGGTCGC GACCTTCCTG GTCGGCGACG GCGCCCGCGC GCTCACCGGC
AACATCGAAT ACATCGACGC CGGATATCAC GTCGTCGGCT GA
 
Protein sequence
MTLQGKKGLV VGIANAESIA FGCARAFRDA GAELAVTYLN DKAKPHVGPL AEQLQSPIVL 
PCDVREPGQL EAVFAQIGET WGRLDFLLHS IAFAPKEDLH GRVVDCSQAG FAMAMDVSCH
SFIRMAKLAE PLMRDGGCLL TVTFYGSEKV VEDYNLMGPV KAALESSVRY MAAELAVKRI
RVHALSPGPL KTRAASGIAR FDELMERTRA RAPAHQLVGI DDVGQVATFL VGDGARALTG
NIEYIDAGYH VVG