Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1013 |
Symbol | |
ID | 3909137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1161703 |
End bp | 1162944 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882906 |
Product | hypothetical protein |
Protein accession | YP_484634 |
Protein GI | 86748138 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACT TTGCCATCGC GGCCGCCCCC TCCCCGGCCA CGGCGCCGCG CCTGCGGGCG CTGCAGCTGG CGCTGCTGTG GTTCGTCGGC GCCAGCGGCG CCATCGTGTT CATCGAGCCG AGCCCGTATG AATTCGCGAT CCTGCTGTCG ATCGTGGTGT TCTTCGCCTC CGGCCTGCGG ATCACGCCGG CGCTGATCGT GCCGATCGCG CTCTTGATCG GCGTCGAACT CGGCTACACG ATCGGCGCCA GCTCCCTGCT CGACGATCCG ATCATCCTGA ACTGGCTGCT GACCTCCTGG TACATGGCGA TCACCGCGAT GTTCTTCGCG CTGGTGACGC TGGAGCACAC CGGCGACCGG ATCGAGGCGC TGGCCAAGGG CTATCTGATC GGCGGGCTGA TCGCGTCGCT GGCCGGCATC GCCGGCTATT TCAACCTGAT CCCCGGCACC ACGGACCTGC TGACCTATGC GGGGCGCGCC CGCGGCACCT TCAAGGACCC GAACGTGCTC GGCGCGTTCC TGATCTTTCC GGCGGTCTAC GCGCTGCAGC GGGTGATCGA GGGCTCGTTC TGGAGCGCGA TGCGCCATGC GATCGCCTTC GGCATCATCG CGCTGGCGAT CTTTCTGGCG TTCTCGCGCG CCGCCTGGGG CACGCTCGCC GGCGCCTCGA TGCTGATGAT CGCGCTGATG TTCGTCACCG CGCCGACGCA GCAGCGGCGA TTGCGGATCG TGATGCTGGC GGCGATCGCC GGGCTGGTGC TGGTCGCCGC CATCGCGGTG CTGCTGTCGT TCGACCGGAT CGACGCGCTG TTCAAGGAGC GCGCCAGCTT CTCGCAACCC TACGACAGCG GTCGGTTCGG GAGGTTCGGC CGGCATCTGC TCGGCGCCGG CATGGCGCTG GACTATCCGA CCGGAATCGG CCCGCTGCAG TTCCGGCGGT TCTTTCCCGA GGACACCCAC AATTCGTTCC TCAACGCCTT CATGTCCGGC GGCTGGATCA GCGGCATCCT GTATCCGGCC CTGGTGTTCA TCACCGCCGC CTACGGGCTG CGCAACGTTT TCGTCCGCAC GCCGTGGCAG CGCACCTACA TCGCCATCGT GGCGACGCTG ATCGTGACGC TGCTGGAAAG CTTCATTATC GATACCGATC ACTGGCGGCA TTATTTCATG CTGATCGGCT TGACCTGGGG CGTGGCAATT GCGAGCAGTC GCCTCCGGTT GCAGAGCCAC GCCGGGCCCT GA
|
Protein sequence | MTDFAIAAAP SPATAPRLRA LQLALLWFVG ASGAIVFIEP SPYEFAILLS IVVFFASGLR ITPALIVPIA LLIGVELGYT IGASSLLDDP IILNWLLTSW YMAITAMFFA LVTLEHTGDR IEALAKGYLI GGLIASLAGI AGYFNLIPGT TDLLTYAGRA RGTFKDPNVL GAFLIFPAVY ALQRVIEGSF WSAMRHAIAF GIIALAIFLA FSRAAWGTLA GASMLMIALM FVTAPTQQRR LRIVMLAAIA GLVLVAAIAV LLSFDRIDAL FKERASFSQP YDSGRFGRFG RHLLGAGMAL DYPTGIGPLQ FRRFFPEDTH NSFLNAFMSG GWISGILYPA LVFITAAYGL RNVFVRTPWQ RTYIAIVATL IVTLLESFII DTDHWRHYFM LIGLTWGVAI ASSRLRLQSH AGP
|
| |