| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1010 |
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| Symbol | |
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| ID | 3909134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1157846 |
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| End bp | 1159168 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882903 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_484631 |
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| Protein GI | 86748135 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCG CGGTGCCGAG CCATCTCGTC GATCCGCCGG CGATCGTCCG GGACGCCGCC
GATCTGCGGC CGGCGGGGCG CGGCGGCCAG TTGCTGCCGC CCGGCTATCT CGGCACGCGG
GGCAGCCAGA TCGTCGACGT GACCGGCCGG CCGGTGCGGA TCGCCTCGAT CGGCTGGAAC
GGCACCGAGG GCCCGCCCGG CGCAGCACCC TCGGGGATCT GGAAGGTCAG CTACCGGACC
GTTCTCGACT CGATCGTCGC CGCGGGCTTC AACACCGTGC GGATTCCATG GACGGATATC
GGCCTCGACA CGCCGCTGAA CGGCTACAGC GACCGGCTCG GCTGGATCAA CACCACGCTC
AATCCCGACC TGCTGGCATC CGACACGCCC GACGCCAACG GGCGCTATCG CTACGTCACC
ACGCTGGTGG CGTTTCAGCG CATCGTCGAC TACGCCGGCG ACATCGGCCT GAAGGTGATT
TTCAATCACC ACACCAATCA GGGCACCGCG GGGCAGCAGC GCAACGGGCT GTGGTTCGAT
CTCGGCCCAG GCACCGACAA CACCGACGGC ATCAAGCCGG GCCGGTTCAC CGCGCAGGAC
TTCAAGCAGA ACTGGCTGCG GGTGGCGCGG ACCTTCGCCG GCAATCCGAC CGTGATCGGC
TACGATCTGC ACAACGAGCC CAACGGCGAC CGCGGCGCCA TCACCTGGGG CGGCGGCGGG
CCGACCGACA TCAAGGCGAT GTGCGAGGAC GTCGGCTCGG CGATCCAGGA CGTCAGCCCC
GACGTGCTGA TCATCTGCGA GGGGCCGGAG ACCTACAAGC CGCCGCCGGA ATCGTCGGGG
ATGGACCCGC GCCACGCCGC GCCCGCGGGC AATCTCACCG CGGCGGGCGC CAATCCGGTG
CGGCTCAAGA TCCCGCACAA GCTGGTGTAT TCGATCCATG AATATCCGGA GGAGATCGCC
GACACCAAGC GCTGGGGCAT TCCGGAGACC GGCAAGGGCT TCATCGACCG GATGAACACC
ACCTGGGGCT ATCTGGTGCG CGACGACATC GCGCCGGTGT GGATCGGCGA GATGGGCGCA
TCATTGCGGA CGCCCGAGAC GCGCGAATGG GCGCGCAATC TGATCGACTA CATGAACGGC
AAATACGGCA GCGAGGGCGG CCCGGCCTTT TCGGGCGATC AGCAGCCGAT CAGCGGCAGC
TGGTGGCTGA TCGGTCCGTC GAACGATCCG CCCTATGGGC TGCAGACGGA CTGGGGCGTC
GGCCACTATC GACCGGACCA GATCGCGATC ACCGACCAGA TGCTGTTTCG GCCGCGCAAG
TAG
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| Protein sequence | MDAAVPSHLV DPPAIVRDAA DLRPAGRGGQ LLPPGYLGTR GSQIVDVTGR PVRIASIGWN
GTEGPPGAAP SGIWKVSYRT VLDSIVAAGF NTVRIPWTDI GLDTPLNGYS DRLGWINTTL
NPDLLASDTP DANGRYRYVT TLVAFQRIVD YAGDIGLKVI FNHHTNQGTA GQQRNGLWFD
LGPGTDNTDG IKPGRFTAQD FKQNWLRVAR TFAGNPTVIG YDLHNEPNGD RGAITWGGGG
PTDIKAMCED VGSAIQDVSP DVLIICEGPE TYKPPPESSG MDPRHAAPAG NLTAAGANPV
RLKIPHKLVY SIHEYPEEIA DTKRWGIPET GKGFIDRMNT TWGYLVRDDI APVWIGEMGA
SLRTPETREW ARNLIDYMNG KYGSEGGPAF SGDQQPISGS WWLIGPSNDP PYGLQTDWGV
GHYRPDQIAI TDQMLFRPRK
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