Gene RPB_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1005 
Symbol 
ID3909129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1150888 
End bp1151247 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content69% 
IMG OID637882898 
Producthypothetical protein 
Protein accessionYP_484626 
Protein GI86748130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGT TTCCGGCAAG GTACCAGACC GCGTTGCGCG TGGCGGCATG GCTGGGTCTG 
GCGTTCGTCG CGATGGCGAC GCTCAGTCCG CTGGGCCTTC GCCCGACCAC CGGATGGCCG
CCGTCGATCG AGCGGTTTCT CGCCTTCGCG CTGGTCGGCG GTTTGTTCGC CGCGGCCTAT
CCGCGTTACA TCCTGTTCGC CGCCGCGATC GTGCTCGGCG CGGCGTTGCT GTTCGAGATC
CTGCAGGTGC TGGCGCCGTC GCGGCACGGC CGGCTGTTCG ATGCCGCGGT GAAACTGTCG
GGCGGAACGG TCGGGCTGAT CGCCGGCTGG CTTGCGGTGC GGTGGATGCC GCGGCGGTGA
 
Protein sequence
MTEFPARYQT ALRVAAWLGL AFVAMATLSP LGLRPTTGWP PSIERFLAFA LVGGLFAAAY 
PRYILFAAAI VLGAALLFEI LQVLAPSRHG RLFDAAVKLS GGTVGLIAGW LAVRWMPRR