Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0994 |
Symbol | |
ID | 3909291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1138049 |
End bp | 1138780 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637882887 |
Product | 3-oxoacyl-acyl carrier protein reductase |
Protein accession | YP_484615 |
Protein GI | 86748119 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.840356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.274345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGG TGGTGGTCAC CGGCGGCAGC CGCGGCATCG GGCTGGCGAT CGCGCAGCGG CTCGCCGCCG CCGGCTACGG CGTCATCGCC GTGGCGCGGC GCGAGAGCGA GGAGCTGACG GCGGCGATCG TCGCGGCCGA AGCCGGCCCG GGCGCGATCC ATTTCAAAGC GTTCGATCTC GGCGAGATCG ACGCCATTCC GGAATTCGTC AAGAGCCTGC GGCAGGAGTT CGGCTCGATC TACGGGCTGA TCAACAACGC CGGCATCGGC ACCGAAGGCG TGCTGGCGAC GATGCACAAC AGCCAGATCG AGGCGCTGAT CCGCATCAAC GTCACCTCGC CGATCGTGCT GACCAAATAC ATCGTCCGGC AGATGATGGC CGACGGCGGC GGCCGCATCG TCAACATGTC GTCGATCATC GGTTCGACCG GCTACAACGG CCTGTCGGTC TACGGCGCCA CCAAGGCGGC GGCCCTCGGC TTTACCCGCT CGCTGGCGCG CGAGGTCGGG CGGCTCGGCA TCACCGTGAA CGCGATCGCG CCGGGCTTCA TCGACACCGA ACTGACCAAG GGCCTCGCCG GCGACGGCCG CGACAAGATC GCGGGCCGCA GCGCGCTGCG GCGACTGCCG GAGGTCGACG ACGTCGCCCG CATGGTCGAG TATCTGCTCG GCGACGGCGG CCGCAACATC ACCGGCGCGG TGCAGACCAT CGATGCGGGG AACACGGCGT AG
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Protein sequence | MRKVVVTGGS RGIGLAIAQR LAAAGYGVIA VARRESEELT AAIVAAEAGP GAIHFKAFDL GEIDAIPEFV KSLRQEFGSI YGLINNAGIG TEGVLATMHN SQIEALIRIN VTSPIVLTKY IVRQMMADGG GRIVNMSSII GSTGYNGLSV YGATKAAALG FTRSLAREVG RLGITVNAIA PGFIDTELTK GLAGDGRDKI AGRSALRRLP EVDDVARMVE YLLGDGGRNI TGAVQTIDAG NTA
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