Gene RPB_0986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0986 
Symbol 
ID3909283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1131485 
End bp1132792 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content63% 
IMG OID637882879 
Productelectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_484607 
Protein GI86748111 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.105953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGG AACGTTTCGA CGCGATCGTG GTCGGCGCCG GCATGGCCGG AAACGCCGCC 
GCGCTGACGA TGGCCAAACG CGGCATGAAG GTGCTGCAGA TCGAGCGCGG TGAATATCCG
GGCTCGAAGA ACGTCCAGGG CGCGATTCTC TACGCCGACA TGCTGGAGAA GCTGGTGCCG
AACTTCCGCG AGGACGCGCC GCTCGAGCGT CATCTGGTGG AGCAGCGGTT CTGGATGATG
GACGAGCGCT CGCACACCGG GCTGCATTAT CGCTCGGACG ATTTCAACGA AGAGAAGCCG
AACCGCTACA CCATCATCCG CGCGCAGTTC GACAAATGGT TCTCCAGCCA GGCGCAGGAA
GCCGGCGCCA TCGTGCTGTG CGAGACCACC GTCAAGGAAC TGGTGAAGGA CGCCTATGGC
AAGGTGATCG GCGTGATCAC CGACCGCGAG GGCGGCGAGG TCCATGCCGA CGTCGTGGTG
CTGGCCGAGG GCGTCAACGG CCTGCTCGGC ACCAAGGCGG ATCTGCGCGA GCGGCCGTCG
CCCGACAAGG TCGCGCTGGC GGTGAAGGAA ATGCACTTCC TGCCCCGCGA GACCATCGAG
GCGCGCTTCA ACCTCAAGGG CGACGAGGGC GTGGTGATCG AGGCGGCGGG CACGATCTCC
CGCGGCATGA CCGGGATGGG CTTCGTCTAC GCCAACAAGG AATCGGTGTC GGTCGGCATC
GGCTGTCTGG TCGCCGATTT CCAGAAATCC GGCGAGACGC CCTACGATCT GCTCGAGCGC
TTCAAGAAGC ATCCCTCGAT CGCGCCGCTG ATCGAAGGCT CCGAGGTCAA GGAATATGCC
GGCCATCTGA TTCCCGAGGG CGGCTACAAG GCGATCCCGC AGCTCTATGG CGACGGCTGG
GTGGTGGTCG GCGACGCTGC GCAGCTCAAC AACGCGCTGC ATCGCGAAGG CTCGAATCTG
GCGATGACCT CCGGCCGGAT CGCCGGCGAG GCGATCTTCC AGGTCAAGTC GCGCAAGGAT
CCGATGACCA AGGAGAATCT GGCGCTCTAC AAGAAGATGC TGGACGAGTC CTTCGTCATC
AAGGATCTGA AGAAGTACAA GGATATGCCG GATCTGCTGC ACATCCAGTC GCAGAACTTC
TTCCTGACCT ATCCGCAGCT CATCAACAAG GCGCTGCAGA ACTTCGTGCG GGTCGACGGC
ACGCCGAAGG TCGACAAGGA GAAGGTGACG ATCAGATCGT TCGTGTCGGC GCGATCCTGG
GCGGGCCTGT TCGGCGACGC CTTCCGCTTC GCGCGGGCAT GGCGGTGA
 
Protein sequence
MIEERFDAIV VGAGMAGNAA ALTMAKRGMK VLQIERGEYP GSKNVQGAIL YADMLEKLVP 
NFREDAPLER HLVEQRFWMM DERSHTGLHY RSDDFNEEKP NRYTIIRAQF DKWFSSQAQE
AGAIVLCETT VKELVKDAYG KVIGVITDRE GGEVHADVVV LAEGVNGLLG TKADLRERPS
PDKVALAVKE MHFLPRETIE ARFNLKGDEG VVIEAAGTIS RGMTGMGFVY ANKESVSVGI
GCLVADFQKS GETPYDLLER FKKHPSIAPL IEGSEVKEYA GHLIPEGGYK AIPQLYGDGW
VVVGDAAQLN NALHREGSNL AMTSGRIAGE AIFQVKSRKD PMTKENLALY KKMLDESFVI
KDLKKYKDMP DLLHIQSQNF FLTYPQLINK ALQNFVRVDG TPKVDKEKVT IRSFVSARSW
AGLFGDAFRF ARAWR