Gene RPB_0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0984 
Symbol 
ID3909281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1129448 
End bp1130344 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content67% 
IMG OID637882877 
Productelectron transfer flavoprotein subunit beta 
Protein accessionYP_484605 
Protein GI86748109 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.892412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0549625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGT GTCAGGCTGA TGTCGTCGTG TCAGCAAGCG CGGAGCACAC CATGCATATC 
GTCGTCTGTA TCAAGCAGGT CCCGGACTCG GCGCAGATCC GCGTGCATCC GGTCACCAAC
ACGATCATGC GCCAGGGCGT GCCGACGATC ATCAACCCGT ATGATCTGTT CGCGCTCGAA
GAGGCGCTGC GGCTGCGCGA CAAGTTCGGC GGCGAGGTCA CGGTGCTGAC GATGGGCCCG
CCCTCGGCCG AGGATTCCCT GCGCAAGGCG CTGACCTTCG GCGCCAACCG CGCGGTGCTG
CTGACCGACC GCTTCTTCGC CGGCGCCGAT ACGCTGGCGA CCAGCTACGC GCTGGCTTCC
GCGATCCGCA AGATCGGCGC CACCTATGGC GAACCGGACA TCGTGTTCAC CGGCAAGCAG
ACCATCGACG GCGATACCGC CCAGGTCGGC CCCGGCATCT GCAAGCGGCT CGACTTCCTG
CAGCTCACTT ACGTCTCCAA GGTCGCGTCG CTGGATCTCG CCGGCCGCAG CATCGAGGTC
GAGCGCCGCT CCGAGGGCGG CGTCCAGGTG CTGCGCAGCC GGCTGCCTTG CCTGATCACC
ATGCTGGAGG GCACCAACGA GGTGCGTCGC GGCACGATGC TGAATGCGCT GAACGCCGCC
CGCGCCGAAG TGGTGAAGTG GAGCGCCCAG GACGCCGGCG TCGAAGACAT TTCCAAATGC
GGCCTGCGCG GCTCGCCGAC CGTGGTCAAG CGCGTGTTCG CGCCGACCGC GCGTTCGGAA
AAAGCCGTGG TGGTGGAGCC GGCCGGCCGC CCGCCGGCCG ACGCGCTGAT CGACGAGATC
TTCAAGCTCC GGCCGAAACT CGAAGCCGAC ATGTTCGAGC TCGCGCGTGG ATTTTGA
 
Protein sequence
MSLCQADVVV SASAEHTMHI VVCIKQVPDS AQIRVHPVTN TIMRQGVPTI INPYDLFALE 
EALRLRDKFG GEVTVLTMGP PSAEDSLRKA LTFGANRAVL LTDRFFAGAD TLATSYALAS
AIRKIGATYG EPDIVFTGKQ TIDGDTAQVG PGICKRLDFL QLTYVSKVAS LDLAGRSIEV
ERRSEGGVQV LRSRLPCLIT MLEGTNEVRR GTMLNALNAA RAEVVKWSAQ DAGVEDISKC
GLRGSPTVVK RVFAPTARSE KAVVVEPAGR PPADALIDEI FKLRPKLEAD MFELARGF