Gene RPB_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0977 
Symbol 
ID3909332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1123401 
End bp1123712 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content61% 
IMG OID637882870 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_484598 
Protein GI86748102 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID[TIGR02936] ferredoxin III, nif-specific 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.316671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTT TTTCATCCCG CGACGGCAAG CCGTGGGAGC CGACCTACAT CACCGCGATC 
GACGGCGACA AGTGCATCGG TTGCGGCCGT TGCTACAAGG TCTGCTCGCG CGACGTGATG
CATCTGATGG GTGTCAACGA GGACGGCGAA CTGGTCGGCT GCAGCCTCGA GAACGACGAT
GACGACGAGG AATTCGTCCG CAAGGTGATG GTGCTGGACC AGCCCGGCAA TTGCATCGGC
TGTTCGGCCT GCAACCGGGT CTGTCCGAAG GATTGTCAGA CCCACGTCAA GGCCAGCGAA
CTCGGGCTGT AG
 
Protein sequence
MTTFSSRDGK PWEPTYITAI DGDKCIGCGR CYKVCSRDVM HLMGVNEDGE LVGCSLENDD 
DDEEFVRKVM VLDQPGNCIG CSACNRVCPK DCQTHVKASE LGL