Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0969 |
Symbol | nifH |
ID | 3909324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1115228 |
End bp | 1116127 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637882862 |
Product | nitrogenase reductase |
Protein accession | YP_484590 |
Protein GI | 86748094 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAC TTCGGCAAAT CGCATTCTAC GGCAAGGGCG GCATCGGCAA GTCGACCACT TCGCAGAACA CCCTCGCGGC TCTGGTCGAG CTCGGTCAGA AGATCCTGAT CGTCGGCTGC GACCCCAAGG CGGACTCCAC CCGCCTGATC CTCAACACCA AGATGCAGGA CACCGTGCTC AGCCTCGCCG CTGAAGCGGG TTCGGTCGAA GACCTCGAAC TCGAAGACGT GATGAAGATC GGCTACAAGG GCATCAAGTG CACCGAAGCC GGCGGCCCGG AGCCGGGCGT CGGCTGCGCC GGCCGCGGCG TCATCACCGC GATCAACTTC CTCGAAGAGA ACGGCGCCTA TGAGGACGTC GACTACGTCT CCTACGACGT GCTCGGCGAC GTGGTCTGCG GCGGCTTCGC GATGCCGATC CGCGAGAACA AGGCCCAGGA AATCTACATC GTGATGTCCG GCGAGATGAT GGCGCTGTAC GCCGCCAACA ACATCGCCAA GGGCATTCTG AAGTACGCCT CCTCGGGCGG CGTCCGCCTC GGCGGCCTGA TCTGCAACGA GCGCCAGACC GACCGCGAGC TCGACCTCGC CGAAGCGCTG GCGGCCCGGC TGAACTCCAA GCTGATCCAC TTCGTGCCGC GCGCCAACAT CGTGCAGCAC GCCGAGCTGC GCCGCCAGAC CGTGATCGAA TACGCGCCCG ACTCGCAGCA GGCGCAGGAA TATCGCCAGC TCGCCAACAA GATCCACGCC AACTCCGGCA ACGGCACCAT CCCGACCCCG ATCACGATGG AAGAGCTGGA AGGCATGCTG CTCGACTTCG GCATCATGAA GACCGACGAG CAGGCGCTGG CCGAGCTCGC CGAGAAGGAA GCCGCCAAGG CGGCCGCCGC CACCGCCTGA
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Protein sequence | MAALRQIAFY GKGGIGKSTT SQNTLAALVE LGQKILIVGC DPKADSTRLI LNTKMQDTVL SLAAEAGSVE DLELEDVMKI GYKGIKCTEA GGPEPGVGCA GRGVITAINF LEENGAYEDV DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMALY AANNIAKGIL KYASSGGVRL GGLICNERQT DRELDLAEAL AARLNSKLIH FVPRANIVQH AELRRQTVIE YAPDSQQAQE YRQLANKIHA NSGNGTIPTP ITMEELEGML LDFGIMKTDE QALAELAEKE AAKAAAATA
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