| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0959 |
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| Symbol | |
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| ID | 3909314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1109005 |
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| End bp | 1110561 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882852 |
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| Product | nitrogenase cofactor biosynthesis protein NifB |
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| Protein accession | YP_484580 |
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| Protein GI | 86748084 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.438509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC TGCTGCAACT CCACGATTTC GGGGCCCCCG GGGCGAAGTC CTTCGAGGCG
CTGCGCGCCG GCGCGGCGCA ATCCGGCTGC AGCACCACGG GCGGCAACGG CAAGTCCGGC
TGCGGCTCGG CGGCTGGACA GGGCGATCTG CCGCCGGAGA TCTGGGAGAA GGTGAAGAAC
CATCCCTGCT ACAGCGAGCA GGCGCATCAT CACTTCGCCC GCATGCATGT CGCGGTCGCG
CCCGCATGCA ACATCCAGTG CAATTACTGC AATCGCAAAT ATGACTGCGC CAATGAATCG
CGCCCCGGCG TCGTCAGCGA GAAGCTGACG CCCGAGCAGG CGGCCCGCAA GGTGATCGCG
GTGGCCTCGA CGATTCCGCA GATGACCGTG CTCGGCATCG CCGGTCCGGG CGACGCGCTC
GCGAACCCTG CCAAGACCTT CAAGACCTTC GAGCTGGTGA CGGCCACGGC GCCCGACATC
AAGTTGTGCC TGTCGACCAA CGGGCTGATG CTGCCCGACT ACGTCGAGCA GATCGCCGCC
ATGAATGTCG ATCACGTCAC CATCACCATC AACATGATCG ATCCGGAGAT CGGCGCGCAG
ATCTATCCGT GGATCTTCTA CAACCACCGC CGCTTCACCG GCGTCGAGGC GTCGAAAATC
CTCAGCGAGC GGCAATTGCT CGGGCTCGAG ATGCTCACCG CGCGCGGCAT CCTGGTGAAG
GTCAATTCGG TGATGATCCC GGGGATCAAC GACCGGCACC TGATCGAGGT CAACAAGGCG
GTGAAGTCGC GCGGCGCCTT CCTGCACAAC ATCATGCCGC TGATCTCCGA GCCGGAGCAC
GGCACGGTGT TCGGTCTCGA AGGCCGTCGC GGCCCGTCGG CGCAGGAGCT CAAGGCGCTG
CAGGACGATT GCGAAGGCGA GATGAACATG ATGCGGCACT GCCGGCAGTG CCGCGCCGAC
GCGGTCGGCC TGCTCGGCGA GGATCGCAGC GCCGAATTCA CCACCGACAA GGTGATGGAG
ATGGAGGTCG AATACGATCT CGCCGCGCGG CAGGCCTATC AGGCCAAGGT CGAGGCCGAG
CGCGACGCCA TCGCCCTCGC CAAGCAGCGC GAACTGGCGA CGCTCGCCGA CGAGACCGCC
ACGATCAAGA TCCAGGTCGC GATCGCCACC AAGGGCGGCG GCGTGATCAA CGAGCACTTC
GGACATGCTC ACGAATTCCA GATCTACGAG GTTTCGACCG CCGGCGCCAA GTTCATCGGT
CATCGCCGCG TCGATCTGTA TTGCGAGGGC GGCTACGCCA GCGAGACCGG CATCGAGCCG
ATCCTGAAGG CGCTGAACGA CTGCACCGCG GTGCTGGTCG CCAAGATCGG TCTGTGCCCG
AAGGATTCTC TGGCCGGCGC CGGGATCGAG GCGGTCGAGG ACTACGCCTT CGAATATATC
GAGCAGTCGG TGATCGCTTA TTTCAAGGAC TACCTCGCGC GCGTCGGGAA GTCGGAAATC
CGCCACGTCG CTCGCGGCGA CGCCGATATT CGCCAGGGCG CGTTCGTCGC GAGTTGA
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| Protein sequence | MSKLLQLHDF GAPGAKSFEA LRAGAAQSGC STTGGNGKSG CGSAAGQGDL PPEIWEKVKN
HPCYSEQAHH HFARMHVAVA PACNIQCNYC NRKYDCANES RPGVVSEKLT PEQAARKVIA
VASTIPQMTV LGIAGPGDAL ANPAKTFKTF ELVTATAPDI KLCLSTNGLM LPDYVEQIAA
MNVDHVTITI NMIDPEIGAQ IYPWIFYNHR RFTGVEASKI LSERQLLGLE MLTARGILVK
VNSVMIPGIN DRHLIEVNKA VKSRGAFLHN IMPLISEPEH GTVFGLEGRR GPSAQELKAL
QDDCEGEMNM MRHCRQCRAD AVGLLGEDRS AEFTTDKVME MEVEYDLAAR QAYQAKVEAE
RDAIALAKQR ELATLADETA TIKIQVAIAT KGGGVINEHF GHAHEFQIYE VSTAGAKFIG
HRRVDLYCEG GYASETGIEP ILKALNDCTA VLVAKIGLCP KDSLAGAGIE AVEDYAFEYI
EQSVIAYFKD YLARVGKSEI RHVARGDADI RQGAFVAS
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