| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0949 |
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| Symbol | |
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| ID | 3909304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1096914 |
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| End bp | 1098929 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882842 |
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| Product | transketolase |
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| Protein accession | YP_484570 |
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| Protein GI | 86748074 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATATCC CCGCACGCGA ACTCCACGAC CAGGTCAGCC ACGCCGAGAT GGCCAATGCG
ATCCGCTTCC TCGCCATCGA TGCGGTCGAG AAGGCGAAGT CCGGCCACCC CGGCATGCCG
ATGGGCATGG CCGATGTCGC CACCGTGCTG TTCACCCGCT TCCTGAAGTT CGATGCCGCC
GATCCGGCCT GGCCGGATCG CGACCGTTTC GTGCTCTCCG CCGGCCACGG CTCGATGCTG
CTCTACGCGC TGCTGCATCT GACCGGCGTC GAAGAGGTCA CGATCGATCA GCTCAAATCC
TTCCGGCAGT GGGGCTCGAA GACCCCCGGC CATCCCGAAT ACGGCCACAC CAAGGGCGTC
GAGACCACCA CCGGCCCGCT CGGCCAGGGG CTCGCCACTT CGGTCGGCAT GGCGCTCGCC
GAGCGAATGC TGAATGCGCG CTACGGCGAC GCGTTGGTCG ATCACTATAC CTATGTGATC
GCCGGCGACG GCTGTCTGAT GGAAGGCGTC AGCCACGAGG CGATCTCGCT CGCCGGGCAC
CTCAAGCTCA ACCGCCTGAT CGTGCTGTGG GACGACAACC ACATCTCGAT CGACGGCGAC
ACCTCGCTGT CGTGCTCGGA CGATCAGCTC GCGCGCTTCG CCGCGTCGGG CTGGGCGACC
ACGCGGGTCG ACGGCCATGA TCCGGAAGCG GTGGCGGCCG CGATCGAGCA GGCTAGGCAG
AGCGACCGGC CGACGCTGAT CGCCTGCCGC ACCACCATCG GGTTTGGCTC GCCCAAGGTC
GCGGGCACCG AAAAGGCGCA CGGCGCGCCG CTCGGCGCCG ACGAGGTCGA GAAGACCCGC
GCCGCATTGA ACTGGCCGCA CGCGCCGTTC GAGATTCCGG ACGCCATCCT CGCGCGCTGG
CGCGAGGATG GCAGCCGCGG CAAGGCCGCG CATCAGGCCT GGGCCGAGCG ACTCGGCAGC
GTCGACGCGG CCACGCGCAC CGGCTTCGAG AACGTGCTCG CCGGCAAGCT GTCGGCCGAC
TACGAACCCG CGCTGAAAGC GCTGATCGCC GGCTTCGCCG CCGAGCAGCC GTCGATCGCC
ACAAGGCAGG CGTCGCAGCT CACCATCAAC GCGCTGGTGC CGGCCTCGCC GAATCTGCTC
GGCGGCTCGG CCGATCTGAC GCATTCCAAC CTCACCCACG CCAAGGGCTC GGCGTCGGTC
AAGCCCGGTG CCTATGGCGG CGCTTACCTG CACTACGGCA TCCGCGAATT CGGCATGGCG
GCGGCGATGA ACGGCATCGC CCTGCACGGC GGCTTCATTC CCTATGGCGG CACCTTCCTG
GTATTCGCCG ACTACAGCCG TCCGGCGATC CGCCTCGCGG CGCTGATGGG CGTGCGTGTC
ATCCACGTGA TGACCCACGA TTCGATCGGC CTCGGCGAAG ACGGCCCGAC CCATCAGCCG
GTCGAGCACG TCGCCTCGCT GCGGGCGATC CCGAACCTGC TGGTGTTCCG TCCGGCGGAT
GCGATCGAGA CCGCGCAGGC CTGGGACTGC GCCCTGAAGC AGACCAGCCG GCCGTCGGTG
CTGGCGCTGT CGCGGCAGGC GCTGCCGATG CTGCCGCGGC CGAACGGCGT CGAGGGGAAC
CCGGTTTCGC GTGGCGCTTA TTTGGTCATC GATCCGGCTA AGCGCGATGT CACACTGATC
GCCACCGGCT CCGAAGTGTC ACTGGCGCTG GAAGCGGCGA GCAAGCTCGA CGGCGAAGGC
ATCAAGGTCG CGGTGGTCTC GGCGCCCTGC TTCGAATTGT TCGCCGAGCA GGACGACGCG
TATCGTGCGG CCGTGCTCGG CACGGCGCCG CGGATCGGCA TCGAGGCCGC GCGCGACATC
GACTGGCGGC GCTGGATCGG CGATGGCGGC GCGTTCGTCG GCATGACCGG CTTCGGTGCC
TCGGCGCCGG CGCCGGTGTT GTACCAGAAG TTCGGCATCA CCGCGGATGC GGTCACGGAG
GCGGCCAAGG CCGCGATCGC CCGCAGCAAA CATTGA
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| Protein sequence | MNIPARELHD QVSHAEMANA IRFLAIDAVE KAKSGHPGMP MGMADVATVL FTRFLKFDAA
DPAWPDRDRF VLSAGHGSML LYALLHLTGV EEVTIDQLKS FRQWGSKTPG HPEYGHTKGV
ETTTGPLGQG LATSVGMALA ERMLNARYGD ALVDHYTYVI AGDGCLMEGV SHEAISLAGH
LKLNRLIVLW DDNHISIDGD TSLSCSDDQL ARFAASGWAT TRVDGHDPEA VAAAIEQARQ
SDRPTLIACR TTIGFGSPKV AGTEKAHGAP LGADEVEKTR AALNWPHAPF EIPDAILARW
REDGSRGKAA HQAWAERLGS VDAATRTGFE NVLAGKLSAD YEPALKALIA GFAAEQPSIA
TRQASQLTIN ALVPASPNLL GGSADLTHSN LTHAKGSASV KPGAYGGAYL HYGIREFGMA
AAMNGIALHG GFIPYGGTFL VFADYSRPAI RLAALMGVRV IHVMTHDSIG LGEDGPTHQP
VEHVASLRAI PNLLVFRPAD AIETAQAWDC ALKQTSRPSV LALSRQALPM LPRPNGVEGN
PVSRGAYLVI DPAKRDVTLI ATGSEVSLAL EAASKLDGEG IKVAVVSAPC FELFAEQDDA
YRAAVLGTAP RIGIEAARDI DWRRWIGDGG AFVGMTGFGA SAPAPVLYQK FGITADAVTE
AAKAAIARSK H
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