Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0945 |
Symbol | |
ID | 3909300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1092767 |
End bp | 1093468 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882838 |
Product | ABC transporter related |
Protein accession | YP_484566 |
Protein GI | 86748070 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGAGG ATCAGTATCT CGACGTTCGC GATCTCGACG CCGGCTATGG CCGTAGTCAG GTGCTGTTCG GCGTCTCGAT GTCGGCGCCG TGGCGCGGCG GCGTCGCCAT TCTGGGCCGC AACGGCGCCG GCAAGACCAC GCTGATGAAG GCGATCATGG GCGAATTGCC GGTGAAGCGC GGCAGCGTTT CGCTCGATGC GCGGGAGGTC ACGAAACTGC CGACCGAGCA GCGCATTCGC GCCGGTTTCG GCTATGTGCC GCAGGACCAT CCGGTGTTCG CGCGGCTGTC GATCCGCGAC AATCTCGCGG TCGGTGCCCT GACCAACAAG GACAGCCGCG CGGTCGATCG CGTGCTGGAG ATGTTCCCGA AACTCGGGCA ACGGCTCGAT CAGGCCGCAG GCACGCTGTC GGGCGGCGAG CGCAAGATGC TGGCGATCGG CCGCGCGTTG CTGTCGGAGC CGCGCGTGCT GTTGCTCGAC GAGCCGACCG AAGGCGTCTG GATCGGCGTG ATCGAAGAGA TCACCGACCG GCTGATCGCG CTGGCCAAGG ACATCGCCGT CATCATCGTC GAGCAGCACC TCGACCTGGC GCTGCGCGTT GCCGACCGCG CCTATGTGCT GGATCGCGGT CGCGTCGCGC TGACCGGCAC CGCCGACGAA GTCCGCAACG ACCCGCGGCT GTTGCAATAT CTCGCGCCGT AG
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Protein sequence | MPEDQYLDVR DLDAGYGRSQ VLFGVSMSAP WRGGVAILGR NGAGKTTLMK AIMGELPVKR GSVSLDAREV TKLPTEQRIR AGFGYVPQDH PVFARLSIRD NLAVGALTNK DSRAVDRVLE MFPKLGQRLD QAAGTLSGGE RKMLAIGRAL LSEPRVLLLD EPTEGVWIGV IEEITDRLIA LAKDIAVIIV EQHLDLALRV ADRAYVLDRG RVALTGTADE VRNDPRLLQY LAP
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