Gene RPB_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0945 
Symbol 
ID3909300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1092767 
End bp1093468 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID637882838 
ProductABC transporter related 
Protein accessionYP_484566 
Protein GI86748070 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGAGG ATCAGTATCT CGACGTTCGC GATCTCGACG CCGGCTATGG CCGTAGTCAG 
GTGCTGTTCG GCGTCTCGAT GTCGGCGCCG TGGCGCGGCG GCGTCGCCAT TCTGGGCCGC
AACGGCGCCG GCAAGACCAC GCTGATGAAG GCGATCATGG GCGAATTGCC GGTGAAGCGC
GGCAGCGTTT CGCTCGATGC GCGGGAGGTC ACGAAACTGC CGACCGAGCA GCGCATTCGC
GCCGGTTTCG GCTATGTGCC GCAGGACCAT CCGGTGTTCG CGCGGCTGTC GATCCGCGAC
AATCTCGCGG TCGGTGCCCT GACCAACAAG GACAGCCGCG CGGTCGATCG CGTGCTGGAG
ATGTTCCCGA AACTCGGGCA ACGGCTCGAT CAGGCCGCAG GCACGCTGTC GGGCGGCGAG
CGCAAGATGC TGGCGATCGG CCGCGCGTTG CTGTCGGAGC CGCGCGTGCT GTTGCTCGAC
GAGCCGACCG AAGGCGTCTG GATCGGCGTG ATCGAAGAGA TCACCGACCG GCTGATCGCG
CTGGCCAAGG ACATCGCCGT CATCATCGTC GAGCAGCACC TCGACCTGGC GCTGCGCGTT
GCCGACCGCG CCTATGTGCT GGATCGCGGT CGCGTCGCGC TGACCGGCAC CGCCGACGAA
GTCCGCAACG ACCCGCGGCT GTTGCAATAT CTCGCGCCGT AG
 
Protein sequence
MPEDQYLDVR DLDAGYGRSQ VLFGVSMSAP WRGGVAILGR NGAGKTTLMK AIMGELPVKR 
GSVSLDAREV TKLPTEQRIR AGFGYVPQDH PVFARLSIRD NLAVGALTNK DSRAVDRVLE
MFPKLGQRLD QAAGTLSGGE RKMLAIGRAL LSEPRVLLLD EPTEGVWIGV IEEITDRLIA
LAKDIAVIIV EQHLDLALRV ADRAYVLDRG RVALTGTADE VRNDPRLLQY LAP