| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0940 |
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| Symbol | |
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| ID | 3909794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1087028 |
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| End bp | 1088542 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882833 |
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| Product | amidase |
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| Protein accession | YP_484561 |
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| Protein GI | 86748065 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.755384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCGTTT CACTTCCCAC CCCCACGCAG CTTCTCGACG TCGCCGATCA GTGCGGCCTG
TCGCTCACCG ATGAGGACGT GATGTCCTTC CGCGCGCTGA TGCAGCCCTC GGTCGATGCC
TACAATGTCG TCGCCGCGTT GCCGGACGAA GTGCCGCTGG TGAAGTATCC GCGCACGCCC
GGCTACTCGC CGGACTCCGA CGAGAATCCG CGCAACGCCT GGTACCGCAA GTCGAGCGTG
AAGGGCGCCG CGTCGGGCAA GCTGACAGGC AAGACCATCG CGCTCAAGGA CAACATCATG
CTGGCCGGCG TGCCGATGAT GAACGGCTCC TCGACGCTCG AAGGCTTCGT CCCGGATTTC
GACGCGACCG TCGTGATGCG GATTCTCGAT GCCGGCGGCG AAATTCTCGG CAAGACGCAT
TGCGAACATT TCTGCATGTC CGGCGGCAGC CACACCGGCT CCAACGGTCC GGTGCACAAT
CCGCACAAGA TGGGCTATTC GGCCGGCGGT TCGTCGTCGG GCAGTGCCGT CGTGGTCGCG
CTCGGCGAGG CCGACATGGC GATCGGCGGC GACCAGGGCG GCTCGATCCG GATGCCGGCG
TCGTTCAGCG GCATCTACGG CATGAAGCCG ACATGGGGCC TGGTGCCCTA CACCGGCATC
ATGCCGATCG AAATCTTCGT CGATCACACC GGCCCGATGA CCGCGAGCGT CGCGGACAAT
GCGCTGTTGC TGGAAGTGCT CGCGGGCGAC GACGGCTACG ATCCACGGAT CCGCGCACCG
GTCGTCCACG ACTACACCAA AGCGCTCGGC GGCGGCGTCA AGGGCATGAA GATCGGCATC
GTCCGCGAAG GCTTCGAACA GGCCGGCGCC GAGCCGGCGG TCAACGAGAG CGTGCGCGAG
GCCGCCAAGC GGCTCGCGAG CCTCGGCGCC ACCGTCGAGG AGATCTCGAT CCCAGCGCAC
AATCTCGCCG CCGCGGTGTG GATGCCGATC GGAACCGAGG GCATGACGCA GACCATGATG
TTCGGTGACG GTTACGGCCT CAGCCGTCCC GATCTGTATT CCACCGCGCT CATGAAGGCG
CATCGCGGCT GGCGCGAACA GGCGGATTCG CTGTCCGAAA CCACCAAGAT GATGCTGCTG
TTCGGCACCT ACATCAACAA CACATTCGGC CCGCGCTATT ACGGCAAGGC GCAGAACATC
TCGCGCCGGG TCACCGCCGC CTATGATGCG GCGCTGGCGA AGTTCGATCT GCTGCTGATG
CCGACGACGC CGATGAAGGC GACGCCGCTG CCGCCGCCCG GCGCCAGCCG CGAGGAGGTC
ATCGGCCGCG CCTTCGAGAT GATCAGCAAC ACCGCGCCGT TCGACATCAC CCATCACCCG
GCGATGTCGC TGCCCTGCGG CATGGTCGAC GGCCTGCCGG TCGGGCTGAT GTTGATCGGC
AAGCATTTCG ACGAGCCGAC GATCTATCGC GCGGCGCACG CCTTCGAGCA GTCCGGCGAC
TGGAAGACGA TGTGA
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| Protein sequence | MAVSLPTPTQ LLDVADQCGL SLTDEDVMSF RALMQPSVDA YNVVAALPDE VPLVKYPRTP
GYSPDSDENP RNAWYRKSSV KGAASGKLTG KTIALKDNIM LAGVPMMNGS STLEGFVPDF
DATVVMRILD AGGEILGKTH CEHFCMSGGS HTGSNGPVHN PHKMGYSAGG SSSGSAVVVA
LGEADMAIGG DQGGSIRMPA SFSGIYGMKP TWGLVPYTGI MPIEIFVDHT GPMTASVADN
ALLLEVLAGD DGYDPRIRAP VVHDYTKALG GGVKGMKIGI VREGFEQAGA EPAVNESVRE
AAKRLASLGA TVEEISIPAH NLAAAVWMPI GTEGMTQTMM FGDGYGLSRP DLYSTALMKA
HRGWREQADS LSETTKMMLL FGTYINNTFG PRYYGKAQNI SRRVTAAYDA ALAKFDLLLM
PTTPMKATPL PPPGASREEV IGRAFEMISN TAPFDITHHP AMSLPCGMVD GLPVGLMLIG
KHFDEPTIYR AAHAFEQSGD WKTM
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