Gene RPB_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0936 
Symbol 
ID3909790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1082354 
End bp1084027 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content65% 
IMG OID637882829 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_484557 
Protein GI86748061 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGC GCCGGTTTCG CGCCGCTGCG GTGCAGACAC TCGCCAAGTT GGGCGATTTC 
GACTTCAACA TCGCACTCGC GACTCGCTAC GTCGAAGACG CGGTTCGCCA GGGCGCCGAG
CTGATCGTAT TTCCGGAGTG CATGGACACC GGCTATCTGT TCGATTCGCC GGAGCATTGC
CGCGAACTGG CGGAGACGCT GGCCGATGGT CCGTTCGTCA AGGCGCTGGC GGCGCTCAGC
CGCAAGCACG GCGTCTATAT CGCCAGCGGC ATCACCGAAT GGGATCCCGC CAAAGAGAAG
ATCTTCAACA CCGGCATCAT GTTCGATCGC AAGGGTGAGG TCGCCTGCCA CTATCACAAG
CAGTTTCTCG CCACCCACGA TCAGAACTGG TTCGCCTTCG GCGAGCGCGG CTGCCCGGTG
GTCGATACCG ACCTCGGCAG GATCGGCCTG CTGATCTGCT TCGACGGCCG CATCCCCGAA
ATCTTCCGCG CCATGACGAT GCAGGGCGCC GAGGTGATCG TCGACATGGC CAATTTCTTC
GCGATGGATC AGGCCGACAT GTGGGGCCCG GCGCGAAGCT ACGAGAACGG CGTCTGGCTG
GTGGCCGCCA CCAAGGCGGG CTACGAGCGC TCGATCTACT ATCCGGGCGG CAGCATGATC
GTCGATCCGA AGGGCCGGGT GCTGTCGAAG GTGCCGTACG ACACCCACGG CATGTCGATC
GCGACGATCG ATCTCGACGC CGCCGCCGAC AAATCGATCT ACACCGCCAA CGACAAGATC
GCCGATCGCC GTCCGGAGAC CTACGGCATC ATGGCGCTGC CGTACGAGCA GACCCCGGTC
TACGGCGTCG CCGATCGTCC GCTGATCCCG TCGAAATCCG TCACCAAGGT GGCGGCGGTG
CAGATTCACG TCACGCCGGA ATGCAGCGTC GCGGAGGTGC TCGACATGGT CGACCACACC
GCCAAGCTCG GCGCCAAGGT GCTGGTGCTG CCGGAATACG CATTCTCCGA GCACTACATC
CTTTCCGTCG AGGAGGCGTC CGAGCAGGCC GACCGGACGG CGGAGAATTT GGCGGCAGTC
GCGAAGATCG CCGCGCGCTA CGGCTGCCTG ATCGCGGCGC CGGTCATCGA GCGCGCCGCC
GCCGGGCTCT ATGTGACCAC CGTGCTGATC GGCCCCGACG GCAAGGAGAT CGGCCGCTAC
CGCAAGACAC ATCTCACCGC CGAAGAGCGC CGGTGGGCGG CCGCTGGCCG TGACTATCCG
GTGTTCGAGA CGCCGTTCGG CCGCATCGGC GTGATGTCGG GCTACGATGC GGTGTTTCCG
GAGACCTCGC GCTGTCTCGC GATCGGCGGC GCCGATATCA TTCTGTGGCC CGCCGCGTTG
CGCGAGCCGT TCGAGCGCGA GCTCATCGCC GTGCCGCGCG CCGAGGACAA CCGGGTGGCG
GTCGTGCTCG CCAACCGCGT CGACAGCCCG TATCCGGGCG GCAGCGTCGT GATCCCGCCG
ACCGGCTTCC CGCAATGGGA CATCAACATC GCCGCTCCGC GGGTGATGAA ACTCGGCGCG
GTCATGCCCA AGCACATAGA TCTGGCGGTC TGCCGCCAGA AGCTGATGAT CCCGAAGGTC
GACATGTTTG CCAACCGGCT GGTGGAGACC TACGCTCCGA TCGTCGCGGC CTAG
 
Protein sequence
MTKRRFRAAA VQTLAKLGDF DFNIALATRY VEDAVRQGAE LIVFPECMDT GYLFDSPEHC 
RELAETLADG PFVKALAALS RKHGVYIASG ITEWDPAKEK IFNTGIMFDR KGEVACHYHK
QFLATHDQNW FAFGERGCPV VDTDLGRIGL LICFDGRIPE IFRAMTMQGA EVIVDMANFF
AMDQADMWGP ARSYENGVWL VAATKAGYER SIYYPGGSMI VDPKGRVLSK VPYDTHGMSI
ATIDLDAAAD KSIYTANDKI ADRRPETYGI MALPYEQTPV YGVADRPLIP SKSVTKVAAV
QIHVTPECSV AEVLDMVDHT AKLGAKVLVL PEYAFSEHYI LSVEEASEQA DRTAENLAAV
AKIAARYGCL IAAPVIERAA AGLYVTTVLI GPDGKEIGRY RKTHLTAEER RWAAAGRDYP
VFETPFGRIG VMSGYDAVFP ETSRCLAIGG ADIILWPAAL REPFERELIA VPRAEDNRVA
VVLANRVDSP YPGGSVVIPP TGFPQWDINI AAPRVMKLGA VMPKHIDLAV CRQKLMIPKV
DMFANRLVET YAPIVAA