Gene RPB_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0935 
Symbol 
ID3909789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1081457 
End bp1082293 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content63% 
IMG OID637882828 
ProductABC transporter related 
Protein accessionYP_484556 
Protein GI86748060 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGG GCAGCGTCCT CCAACTGCGG CCGAAGCAGA TGACCGATAC CGCACCGATG 
CCCGCCGCGT CGAAACCCGG CCGGCAGGCG AAGATGACGA TCCGCGGCCT GCGCAAGACC
TTCAACGACG CCGTCGTCTA CGACGGTTTC GACTTGGATC TTCCGCTCGG CCAGTTCATC
TCGGTGTTCG GTCCGAACGG CTGCGGCAAG AGCACGCTGA TCAACATGAT CTCCGGCCTG
ATGCCGATGG ATGCCGGTGA GGTGCTGTAC GACGGCCAGC GCATCAGCGA GACGCGGATC
TCCTACGTGT TCCAGAACTA TCGCGAGGCG CTGTTTCCGT GGTTGAAGGC GATCGACAAC
ATCCATTACC CGCTGAAGGT GATGGGCGTG CCGCGCGCCG AGCGGAAGCG CCGGATCGAG
AAGCTGCTGG CGGAGTTCGA GATCCGGATC GATCTCAACG CCTATCCCTA CACGCTGTCG
GGCGGCCAGC AACAAACCGT GTCGATCCTG CGCGCGCTGG TGACGGAGCC GGAGGTGCTG
TTCCTCGACG AGCCGTTCTC GGCGCTCGAC TACGAGATGA CGATGTCGAT GCGCGAGCAG
TTGCAGAAGA TCTTCATGAA GACGAGGACC ACGATGCTGC TGGTGTCGCA CGACCTCGAC
GAGGCGATCG AGCAAGCCGA CAAGCTGGTC CTGCTCACCC GGCGGCCGAC CCAGGTCGCC
GAGATCGTCG AGATCGGCCT GCCATGGCCG CGCGACCGCG CCGTCACCAC GGGTGACGAC
TTCATGGCGC TCAAGCGCCA TTGCCTCGAT CGCTTCTGGC AGGAAGTCAA GAAATGA
 
Protein sequence
MNAGSVLQLR PKQMTDTAPM PAASKPGRQA KMTIRGLRKT FNDAVVYDGF DLDLPLGQFI 
SVFGPNGCGK STLINMISGL MPMDAGEVLY DGQRISETRI SYVFQNYREA LFPWLKAIDN
IHYPLKVMGV PRAERKRRIE KLLAEFEIRI DLNAYPYTLS GGQQQTVSIL RALVTEPEVL
FLDEPFSALD YEMTMSMREQ LQKIFMKTRT TMLLVSHDLD EAIEQADKLV LLTRRPTQVA
EIVEIGLPWP RDRAVTTGDD FMALKRHCLD RFWQEVKK