| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0929 |
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| Symbol | |
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| ID | 3909783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1073005 |
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| End bp | 1074579 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637882822 |
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| Product | cytochrome bd ubiquinol oxidase, subunit I |
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| Protein accession | YP_484550 |
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| Protein GI | 86748054 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00513286 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGACT CAACATTCGT AGAGCTGTCG CGCTGGCAGT TCGCCGCGAC CGCGCTCTAT
CATTTCCTGT TCGTGCCGCT GACGCTCGGA CTCTCCTGGC TCCTGGTCAT CATGGAGACG
GTCTACGTGA TGACCGGCAA GGAGATCTAC AAGGACATGA CGAAGTTCTG GGGCAAGTTG
TTCGGCATCA ACTTCGCCCT TGGCGTCACC ACAGGCCTGA CCATGGAGTT CGAGTTCGGG
ACCAACTGGT CGTACTACTC GCACTATGTC GGCGACGTGT TCGGCGCGCC GCTGGCGATC
GAAGGCCTGA TGGCGTTCTT CCTGGAATCG ACCTTCATCG GCCTGTTCTT CCTCGGTTGG
GACCGGCTGT CGAAGCGCAA GCATCTGGCG GTGACGTTCC TCACCGCGAT CGGCTCGAAC
CTGTCGGCGC TGTGGATCCT GATCGCCAAC GGCTGGATGC AGAATCCCGT CGGCTCGGTG
TTCTCGCCGG AGACGATGCG GATGGAGATG ACCAGCTTCG CCGAGGTGTT CCTCAACCCG
GTGGCGCAGG TGAAGTTCGT CCACACCGTC GCGGCGGGCT ACGTCACCGC GTCGGTGTTC
GTGATGGGCA TCTCCGCCTG GTACATCCTG AAGGGGCGGG ATCTGGCGTT CGCGCGTCGC
TCGTTCGCGG TCGCGGTCGG CTTCGGCCTG GCGTCGTCGC TGTCGGTGAT CGTGCTCGGT
GACGAGAGCG GCTACACCCT CGGCGACGTG CAAAAGGTCA AGCTCGCCGC GATTGAGGGC
GAATGGCACA CCGAGAAGCC GCCAGCGGCG TTCACGCTGT TCGGCTTCCC GAGCCAGACC
GGCCAGGCGA TCGCCGACGC GATCAAGATC CCCGCGGTGC TCGGGCTGAT CGCGACGCGG
TCGATCGACA AGCCGGTGCA GGGCCTGGCC GACCTCGAAC GCGAGCATCT GGCGCGGATC
GAATCCGGGC GGATCGCCTA TGCGGCGATG ACCAAGATTC GCGCCGGCGA CACGTCGCCG
GAGACCCGCA AGACCTTCGA CGCCCACGTC AGGGACCTCG GCTTCGGCCT GCTGCTGAAG
CAGTTCGTCG AGGATCCGGC GAACGCCACG CCGGAGCAGA TCAAGGCCGC CGCGGCGTCG
ACCATCCCGA CGGTGTGGCC GCTGTTCTGG GCGTTCCGCA TCATGGTCGC GCTGGGCTTC
CTGATGCTGT TCACCTTCGC GGCCGGCTTC TGGTTCAACG CGACCAAGCG GCTCGAACAG
AAGCGCTGGT TCCTGTGGTT CACGGTGCTG TTGATCCCGG CGCCGTGGCT CGCCTCGGAA
GCGGGATGGT TCGTCGCCGA ATTCGGCCGG CAACCGTGGG CGATCGGCGA AGTGCTGCCG
ACCTTCCTGG CGACCTCGAG CCTGACCACG GGAGATTTGA TCTTCTCGCT GACCGGCTTC
CTGGCCTTCT ACACGCTGCT GCTGGTGATC GAGGTGTACC TGATGTTCAA GTTCGCCCGG
CTCGGTCCGA GTTCGCTTGG CACCGGGCGT TATCACTTCG AGACCAACGC CAAGCCCGCC
GCAGTGACAG TGTGA
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| Protein sequence | MVDSTFVELS RWQFAATALY HFLFVPLTLG LSWLLVIMET VYVMTGKEIY KDMTKFWGKL
FGINFALGVT TGLTMEFEFG TNWSYYSHYV GDVFGAPLAI EGLMAFFLES TFIGLFFLGW
DRLSKRKHLA VTFLTAIGSN LSALWILIAN GWMQNPVGSV FSPETMRMEM TSFAEVFLNP
VAQVKFVHTV AAGYVTASVF VMGISAWYIL KGRDLAFARR SFAVAVGFGL ASSLSVIVLG
DESGYTLGDV QKVKLAAIEG EWHTEKPPAA FTLFGFPSQT GQAIADAIKI PAVLGLIATR
SIDKPVQGLA DLEREHLARI ESGRIAYAAM TKIRAGDTSP ETRKTFDAHV RDLGFGLLLK
QFVEDPANAT PEQIKAAAAS TIPTVWPLFW AFRIMVALGF LMLFTFAAGF WFNATKRLEQ
KRWFLWFTVL LIPAPWLASE AGWFVAEFGR QPWAIGEVLP TFLATSSLTT GDLIFSLTGF
LAFYTLLLVI EVYLMFKFAR LGPSSLGTGR YHFETNAKPA AVTV
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