Gene RPB_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0903 
Symbol 
ID3909083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1040763 
End bp1042385 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content69% 
IMG OID637882796 
ProductFAD-dependent oxidoreductase 
Protein accessionYP_484525 
Protein GI86748029 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC GCGAGAGTTT CCAGTTCGGT TATCGCCGCC ACCCCGATCA GGACCGCGCA 
GCCCCGGATG GTGGGCGCGA GCCGGCGCGC CATCCCGTGG TGATCGTCGG CGCCGGCCCT
GTCGGGCTGT CGCTGGCGAT CGATCTGGCG CAGCGCGGCC AGCGCGTCGT ACTGCTCGAC
GACGCCGACC GGATCGGCGA GGGCTCGCGC GCGATCTGTT TCTCCAAGCG CGCGCTGGAA
GTGTGGGACC GGCTCGGCGT CGGCAGCCGC ATGGTCGAGA AGGGCGTGGT CTGGCAGGTC
GGCAAGATCT TCCGCCGCGA CGAGATGGTG TATCGCTTCG ACCTGCTGCC CGAGACCGGC
CACAAGATGC CGGCCTTCAT CAATCTGCAG CAATATTACG CCGAAGCCTT CCTGGTCGAC
CGCGTGCAGG AACTGCCGCA GATCGATCTG CGCTGGCGCA ACAAGGTGAT CGCGCTGGCG
CAGCACAACG ACCACGCGGT GCTGACGATC GAGACGCCGG ACGGGCCGTA TCGGTTGGCG
GCGGACTACG TGGTGGCCTG CGACGGCGCG CGCTCGGCGT TGCGCGGCCT GGTCGGCGCG
GAGTTCGAAG GTGAAGTGTT CGAGGATCAG TTCCTGATCG CCGACGTCAA GATGACGGCG
GAATTCCCCA CCGAGCGCTG GTTCTGGTTC GATCCGCCGT TCCATGCCGG GCAGTCGGCG
CTGCTGCATC GCCAGCCCGA CGATGTGTGG CGCATCGATC TGCAGATCGG CGCCGAGGCC
GACGCGGCGG TCGAGCGATT GCCCGAGAAT GTCCGGCCGC GGATCGAGCG GATGCTCGGC
CACGGCGATT TCTCCTTCGA GTGGATCTCG GTCTACAAGT TCCAGTGCCG GCGGATGCAG
CGCTTCCTGC ACGAGCGGGT GATCTTCGCC GGCGATTCCG CGCATCAGGT CTCGCCCTTC
GGTGCGCGCG GCGCCAATTC CGGGCTCGAG GATGGCGAGA ACCTTGCCTG GAAACTCGCG
CTGGTGCTGC GCGGCGAGGC GCCCGCGAGC CTGCTCGACT CTTATGAAAT CGAACGCGGC
CAGGCCGCCG ACGACAACAT CCGCCATTCG ACCCGCTCGA CCGATTTCAT CGCGCCGCAT
TCGCAGCAGG AGCGCCGGCT GCGCGATGCC GCGCTGGCGC TCGCCAAGGA GGTCGACTTC
GCCAAGCGCA TGGTCAATGC CGGCCGGCTG TCGACGCCGA CCGTCTACGA CAGTCCGCTG
TCGACGCCCG ATGCCGATGC CTGGGGCGCG GGGCCGAAGC CCGGCGCGGC GATGCTCGAT
GCGCCGCTGG CGGCGGATGG CGCGCCGATG TTCCTCACCG AGGCGTTCAA ATCCGCCGGC
TGCGACTTCG TGCTGCTCGA GAGCGCCAAT GGTGTTGCCG CGCCGGTGCC GCAAGGTGTG
CGCAGCCTGC GCATCGGCAA GGACTCGCCG CTGCAGGACG CCGAAGGCGT GTTCGCCAAA
CGCTACGACG CCACCCCGGG CTCGGCCTAT CTGCTCCGCC CCGACGGCTA CGTCGCCGCG
CGGTTCCGGC ATCCGACGAC AGCTACAATC CATGCGGCGC TGGCGCGGGC AAGCGGGCGA
TGA
 
Protein sequence
MPARESFQFG YRRHPDQDRA APDGGREPAR HPVVIVGAGP VGLSLAIDLA QRGQRVVLLD 
DADRIGEGSR AICFSKRALE VWDRLGVGSR MVEKGVVWQV GKIFRRDEMV YRFDLLPETG
HKMPAFINLQ QYYAEAFLVD RVQELPQIDL RWRNKVIALA QHNDHAVLTI ETPDGPYRLA
ADYVVACDGA RSALRGLVGA EFEGEVFEDQ FLIADVKMTA EFPTERWFWF DPPFHAGQSA
LLHRQPDDVW RIDLQIGAEA DAAVERLPEN VRPRIERMLG HGDFSFEWIS VYKFQCRRMQ
RFLHERVIFA GDSAHQVSPF GARGANSGLE DGENLAWKLA LVLRGEAPAS LLDSYEIERG
QAADDNIRHS TRSTDFIAPH SQQERRLRDA ALALAKEVDF AKRMVNAGRL STPTVYDSPL
STPDADAWGA GPKPGAAMLD APLAADGAPM FLTEAFKSAG CDFVLLESAN GVAAPVPQGV
RSLRIGKDSP LQDAEGVFAK RYDATPGSAY LLRPDGYVAA RFRHPTTATI HAALARASGR