| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0901 |
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| Symbol | |
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| ID | 3909081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1038118 |
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| End bp | 1040034 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882794 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_484523 |
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| Protein GI | 86748027 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGG CTCGGACACG AATTCTGGCT GGCTTCGCCT TCGCGATGGC GACCTCGGTT
TCCACCGGCG CCGTTGCGGC GTGTACCGGC ACCGGCAGTT TCGTTCCGGG TCTGGTACCG
GGCTTCAACC CGTCATCGGT TCTTCCATTC GCCGCCGGTG GCGCGGTGAA CTCGCTGGTC
TCGGCGATCA ACACGGCGAA CACCGCGTTT CTCACCCAGT CGACCGCCTT CGTCAGCGCG
CCGGCGAGTC CGCGGCCGAA TCAGGAAGGC GGCGGGGTCT GGACCCGCGC GATCGGCGGT
GAGGTCACCA CCAAATCGAC CAGCACCACC ACCAACGTCG CAGTCGGAGG CGTCGGCCTG
CCCGGCACCG TGACCTGCGA CAACGAGAAC AAGCTCAGCT TCGCCGGCGT CCAGGTCGGG
GCCGATACCT CGGTCCTGAA CTACAACGGC TGGAACCTGC ATCTCGGCTC GACGGTGGGC
TATATCGGCG CCAAGTCGCG CGACAAATCG TCGGCCGGGG TGCTCAATCC GCTCGGCGGC
ACCTTCGAGG ACACGCTGCA GGTTCCGTTC GCGGGCGTCT ATGTCGCCAT GACCAAAGGC
GGCTTCTTCG CCGACGGCCA GGTCCGCCTC GACTACTACC AGAACTCGCT GAGCGACCCG
ATCGTCGGCG GCATTTTCGG CCAGAAGCTG GATGCCCGCG GCCTCTCCTT CACCGGCAAT
GTCGGCTACA ATCACGCGCT GCAGAACAAC TGGTTCATCG AGCCGTCGGC CGGCGTGGTG
GTGTCGAAGG TCAAGGTCGA TCCGCTCAAC GTCACCGGTT CGCTGGTGCT GCCCGCGAGC
TTCACCCCGG GCGTGACCTT CCCCGGCCAA TTGCAGGTCG ACGACATCAA CAGCACGCTC
GGTCGCTTCA GCCTGCGCGG CGGCACCAGC ATCGCCTCGG GCAACATGAT CTGGCAGCCC
TTCGCGATCG CCAGTGTGTA TCACGAATTC AGGGGCGCGG TGACCTCGTC GTTCAACGGC
GCGGCGGCGT CGGCGGCCAC CGGTCTTCCG TCGGCGACCG GCAACATCTC CAGTTCCAAC
CTCGGCACTT ACGGCCAGTT CGGCATCGGC GTCGCCGGTC AACTCGTCAA CACCGGCCTG
CTCGGCTACA TCCGCGCCGA CTATCGCGCC GGCGAGAACA TCGACGGCTA CAGCTTCAAC
GGCGGCGTGC GCTATCAATT CGCCCCCGAG GCGGTGGCCG CGGCTCCGCT CTACACCAAG
GCGGCGAAGG CGCCGATTCT GGTTCACTCG GCCTACAACT GGACCGGCTT CTTCGTCGGC
GGCAGCTTCG GCGTGCTGAA CGGCCGCACC GACTGGACGT TCCAGCCCGG CGGCACCACC
ACCGACCCGC GCTTCGCCGG CGCCATCGGC GGCGGCCAGA TCGGCTACGA CTATCAGTTC
GGCAAATGGG TGGTGGGCGT CGAGGGCGCG CTCAATGCGA CCAACGCCAA CGGCGCGCGG
CCGTGCCCGT CCAGCGTGTT CTTCACCTGC GAGACCAATG TCAGCTGGAT GGGAACCGCG
ACCGCCAAGC TCGGCTATGC GTTCTGGGAT CGCTCGCTGT GGTACGTCCG CGGCGGCGGT
GCCTTCGGCG ACCTGAAGGT CACCACGACC TGCAACACCG GACCGTTCAA CCCGCTCGGC
CTCGCGGGTT GCGGCGAGAA CGCCAGCCGC AGCCGCGCCG GCTGGACCAT CGGCATCGGC
TCGGAATTCG CGCTCAGCAA GAACTGGACG GTGCGGACCG AGACCAATTA TTTCGACATG
GGCCGCGAGC GCTACGTGCT GCCGACCTCG ACGATCGACG TCAAGCAGAA CGGCTTCATC
TCGACCGTCG GTGTGAACTA TCGCTTCGCG CCGACCACGC TGGTCGCGAA ATACTGA
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| Protein sequence | MQKARTRILA GFAFAMATSV STGAVAACTG TGSFVPGLVP GFNPSSVLPF AAGGAVNSLV
SAINTANTAF LTQSTAFVSA PASPRPNQEG GGVWTRAIGG EVTTKSTSTT TNVAVGGVGL
PGTVTCDNEN KLSFAGVQVG ADTSVLNYNG WNLHLGSTVG YIGAKSRDKS SAGVLNPLGG
TFEDTLQVPF AGVYVAMTKG GFFADGQVRL DYYQNSLSDP IVGGIFGQKL DARGLSFTGN
VGYNHALQNN WFIEPSAGVV VSKVKVDPLN VTGSLVLPAS FTPGVTFPGQ LQVDDINSTL
GRFSLRGGTS IASGNMIWQP FAIASVYHEF RGAVTSSFNG AAASAATGLP SATGNISSSN
LGTYGQFGIG VAGQLVNTGL LGYIRADYRA GENIDGYSFN GGVRYQFAPE AVAAAPLYTK
AAKAPILVHS AYNWTGFFVG GSFGVLNGRT DWTFQPGGTT TDPRFAGAIG GGQIGYDYQF
GKWVVGVEGA LNATNANGAR PCPSSVFFTC ETNVSWMGTA TAKLGYAFWD RSLWYVRGGG
AFGDLKVTTT CNTGPFNPLG LAGCGENASR SRAGWTIGIG SEFALSKNWT VRTETNYFDM
GRERYVLPTS TIDVKQNGFI STVGVNYRFA PTTLVAKY
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