| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0897 |
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| Symbol | |
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| ID | 3909077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1032272 |
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| End bp | 1033897 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882790 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_484519 |
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| Protein GI | 86748023 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.713797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC GCATCGCGTT GCTCGTCCTC CTCACGCTGC TGACGGCGCC GGCGACCCGA
TCGAATGCCG CGGACGATCG CGGCGGGCGC GTCGCGCTGG TGATCGGCAA CGCCAAATAT
CCCGACTCCG AGAAGCCGCT CAAACAGCCG GTCAACGATG CGCGCGAACT GGCCGACGAG
TTGAAGCGCG ACGGCTTCGA CGTCGATGTC GGCGAGAATC TCGGCGGCGA TGCGATGCGG
CGCGCCTTCG ACCGGCTGTA CAATCGCGTC AAGCCGGGTT CGGTCGCGCT GGTGTTCTTC
AGCGGCTTCG GCATCCAGTC CGGACGGCAG AGCTACATGA TCCCGGTCGA CGCCCAGATC
TGGACCGAGC CGGACGTCCG CCGCGACGGC ATCGGCCTCG AGACCGTGCT CGGCGAGCTC
AACAGCCGCG GCGCCACCGT CAAGATCGCG CTGATCGACG CGTCGCGCCG CAATCCGTTC
GAACGCCGGT TCCGCAGCTT CTCGGCCGGC CTCGCCCCGA TCATCGCGCC CGGCGGTTCG
CTGGTGATGT ACTCCGCCGC ACTGAGTTCA GTCGTGAGTG ACAATGGCGG CGATCGCAGC
CTGTTCGTCA GCGAACTGCT CAAGGAAATC CGCGTGCCGG GGCTCGGCGC CGAGGAAGCG
CTCAACCGCA CCCGCGTCGG CGTCACCCGG GCGTCGCGCA GCGAACAGGT GCCGTGGATC
TCGTCGTCCC TGGCGGAGGA TTTCGCCTTC GTGCCCGCGG CCGCCACGGC CGCGAGCGAC
AGCGCGCCGA AGCCCGCCGC GACCGCCGCG CCCGCGACCA GCCCGATCGT CGATCGCACC
CCGCCGGAGG CGCCGGCCGC CCCCAAGCCG GTCGAGGCCA AACCCGCCGA AATCAAGCCT
GCCGAAACCA AGCCGGCCCC GACGCCACCC GTCGCAGCCG CGGAGCCCAA GCCCGCGCCG
CTACCGGCCG CCGCGCCCGA CAAGCCGGCC GAACTCGCCA AGCAGATCGA GCTGCCGAAG
CCGATCGACG TGCCGAAGGA ACTGCCCAAG GAGCTGTCGA AGGAGCTCGG CACCAAGGTC
GAGCCCGCCG ATCCCAAGCA GAACGACGAC AAGATCAGGC TGGCGCTGCG CGACGACCCG
ACGGTGCAGA GCCTGAACAA GCGGATCGAC GACAATCCGG CGGACGCCAA CGCGCTGTAT
CGCCGCGGCC AGGTCTATGC CAGCAAGGGC GCCTATTGGT CGGCGATCAA GGATTTCGAC
GAGGCGCTCC GGCTCAACCC GCGCGACGTC GAGGCCTACA ACAATCGCTG CTGGGTGCGC
ACTGTCGTCG ATGAACTGAC CGCAGCGCTC AAGGACTGCA ACGAGGCGCT GCGGCTGCGT
CCGAATTTCG TCGACGCGCT GGACAGTCGC GGCCTGCTCA ACCTCAAGAA CGGCCAGAAC
AAGAACGCGA TCGCCGATTT CGACGCGGCG CTCAAGATCA ATCCGCGGTT GACGTCGTCG
CTGTATGGCC GCGGCCTCGC CCGGCAGCGC GCCGGGATGA AATCCGAAGG CGAGATCGAT
ATCACCACCG CCAAGGGGAT GGACCCCAAC ATCGTGAAGG AGTTCGACAG CTACGGGGTG
CGCTGA
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| Protein sequence | MKIRIALLVL LTLLTAPATR SNAADDRGGR VALVIGNAKY PDSEKPLKQP VNDARELADE
LKRDGFDVDV GENLGGDAMR RAFDRLYNRV KPGSVALVFF SGFGIQSGRQ SYMIPVDAQI
WTEPDVRRDG IGLETVLGEL NSRGATVKIA LIDASRRNPF ERRFRSFSAG LAPIIAPGGS
LVMYSAALSS VVSDNGGDRS LFVSELLKEI RVPGLGAEEA LNRTRVGVTR ASRSEQVPWI
SSSLAEDFAF VPAAATAASD SAPKPAATAA PATSPIVDRT PPEAPAAPKP VEAKPAEIKP
AETKPAPTPP VAAAEPKPAP LPAAAPDKPA ELAKQIELPK PIDVPKELPK ELSKELGTKV
EPADPKQNDD KIRLALRDDP TVQSLNKRID DNPADANALY RRGQVYASKG AYWSAIKDFD
EALRLNPRDV EAYNNRCWVR TVVDELTAAL KDCNEALRLR PNFVDALDSR GLLNLKNGQN
KNAIADFDAA LKINPRLTSS LYGRGLARQR AGMKSEGEID ITTAKGMDPN IVKEFDSYGV
R
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