| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0894 |
|---|
| Symbol | |
|---|
| ID | 3909074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1027144 |
|---|
| End bp | 1030326 |
|---|
| Gene Length | 3183 bp |
|---|
| Protein Length | 1060 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637882787 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_484516 |
|---|
| Protein GI | 86748020 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTCA ACGTCTCCTC CTGGTCGATC CGGCATCCGC TGCCCTCGAT CGTGTTCTCG
ATCATCCTGC TGGCGCTGGG CTGGATCAGC TTCACCAAGC TCGCGGTGAC GCGGCTGCCG
AGCGCCGACA TCCCGGTGAT CTCGGTGGCG GTGGCGCAGT TCGGCGCGGC CCCGGCCGAG
CTGGAAGCGC AGGTCACCAA GACCATCGAG GACGGCGTCT CCGGCGTCGA GGGCGTCCGC
CACATTGCCT CGTCGATCAC CGACGGGCTG TCGGTCACGA CGATTCAGTT CGCGCTCGAG
ACCAACACCG ACCGCGCGCT GAACGACATC AAGGACGCCA TCACCAGGGT CCGCAGCAAC
CTGCCGCAGA ACGTCAACGA GCCGCTGATC CAGCGCGTCG ACGTGATCGG CCTGCCGATC
CTCACTTACG CGGCGATCTC GCCCGGCAAG ACGCCGGAGC AATTGTCGTG GTTCGTCGAC
GACGTGGTCA AGCGCGCGCT GCAGGGCGTG CGCGGCGTGG CGCAGGTCGA GCGCATCGGC
GGCGTCGAGC GCGAGATCCT GGTGTCGCTC GATCCGGACC GGCTGAAGGC CGCGGGCCTG
ACCGCGCTCG ACGTGTCGCG ACGGCTGCGC GGCACCAATG TCGACCTCGC CGGCGGCCGC
GCCGAAATCG GCCGCAACGA CCAGGCGATC CGCACCTTGG CCGGCGCGAA AACGCTGAAC
GACCTCGCCG GCACCATGAT CAGCCTGCCG TCCGGCGGCG AAATCCGCCT CGACGACCTC
GGCACCGTGA CCGACACCAT CGCCGACCGC CGCACCTTCG CCCGCGTCAA CGGCGAGCCG
GTGGTGGCGC TCGGCATCAA GCGCTCCAAG GGCGCCAGCG ACGTCGTGGT CGCGGAAGCC
GTGCAGAAGC GGATCGAGGC CCTGAAGGCG CAGCATTCCG ACGTCGATCT CAAGCTGATC
GACACCTCGG TCGACTACAC CAAAGGCAAT TACGAAGCCG CGATCTCGAC GCTGTTCGAG
GGCGCGATCC TTGCGGTGAT CGTGGTGTTC CTGTTCCTGC GCGACCTGCG CGCCACCGTG
ATCGCCGCGA TCTCGCTGCC GCTGTCGATC TTCCCGGCGT TCTGGGCGAT GGACATGCTG
GGCTTCTCGC TGAACCTGGT CAGCTTCCTC GCCATCACGC TGTCGACCGG CATTCTGGTC
GACGACGCCA TCGTCGAGAT CGAGAACATC GTCCGCCATA TGCGGATGGG CAAATCGCCC
TATCAGGCGG CGATCGAGGC CGCCGACGAA ATCGGCCTCG CGGTGATCGC GATCTCGCTG
ACCATCATCG CGATCTTCGC GCCGGCGAGC TTCATGTCCG GCATCGCCGG ACAGTTCTTC
AAGCAGTTCG GCATCACGGT TTCGGTGCAG GTGTTCTTCT CGCTGCTGGC GGCGCGCTTC
ATCACGCCGG TGCTCGCCGC CTATTTCCTC AAGAACGTCT CGCACGAGGA GAAGCCGCCG
GGCCGCGTCC TGCAGGCCTA CACCCGCATG GTGACGTGGT CGGTGAAGCA CTACTACCTC
ACGGTGCTGA TGGGGCTCGG GGTGTTCGCC GCGTCGATCT GGAGCATCGT GCTGCTGCCG
CAGGGCTTCC TGCCGGCGCA GGACACCGCG CGCTCGGTGA TGGCGATGGA GCTGCCGCCC
GGCACCCAGA TCCGCACCAC CGAAAAGACC ACCGAGCGGA TCGTCACGCT GTTGCGCCAG
CGGCCCGAGG TGCGCAGCGT GTTCGTCGAC GGCGGAAGGG TGCCGCCGGG CATCCAGGAG
GTCCGCCGCG CCTCGCTGAT CATCAACTAC ACGCCGAAGG GCGACCGCAA GATCACCCAG
CGCGACCTCG AACTGGCGAT CAGCAAGGAT CTCGACCAGA TTCCCGACAT CCGCTATTGG
TTCCTCGACG AAAACGGCCT GCGCGCAATC TCGCTGGTGG TGACCGGCGC CGACAGCAAC
ATCGTCAACA ACGTCGCCCA GGAACTGGCG GCGCAGATGA AGCGCATCCC GATCATCTCC
AACGTGATCT CCGAGACCTC GCTCGACCGG CCCGAATTGC GGATCCAGCC GCGCGCCGAT
CTCGCCGCCC GGCTCGGCGT CTCGACCGAG AGCCTGTCCG AAACAATTCG CGTCGCCACC
ATCGGTGACG TCGGCCCGGC GCTCGCCAAA TTCGACGCCG GCGACCGGCT GGTGCCGATC
CGGGTGCAGC TCGAGGACGG CGCGCGCGGC GAGCTCGGCG TGCTGGAGCA GCTCCAGGTG
CCGATCTTCG GCGGCCGCGG CTCGGTGCCG CTGTCGGTGG TCGCCGACAT CAAGTTCGAC
CAGGGCCCGA CCAGCATCAA CCGCTACGAC CGCGAACGTC AGGCCACCGT GGCCGCCGAT
CTGGTCGGCA ACGCCGCGCT CGGCGACGCC ACCAAGCTGA TCAACGATCT GCCGGTGATG
AAATCGCTGC CGAAGGGCGT CCGCGTCAGC CCCTCCGGCG ACGCCGAAAG CCTGAACGAA
CTCTCGGACG GCTTCGCCAC CGCGATCTCG GCCGGCCTGA TGATGGTCTA TGCGGTGCTG
GTGCTGCTGT TCGGCACCTT CCTGCAGCCG ATCACCATCC TGTTCTCGCT GCCGCTGTCG
ATCGGCGGTG CGATCGCCGC GCTGCTGGTC ACCGGCAAGC AGCTCACCAC GCCGGTGTGG
ATCGGCATCC TGATGTTGAT GGGCATCGTC ACCAAAAATG CGATCATGCT GGTCGAGTTC
GCGCTGGAGG CGATCCGCGA GGGCAAGCCT CGCGAAGCGG CGATGATCGA CGCCGGCCAG
AAACGCGCCC GGCCGATCGT GATGACGACC ATCGCCATGG TGGCCGGCAT GGTGCCGAGC
GCGCTGGCGT TCGGCGCCGG CGGCGAATTC CGCTCGCCGA TGGCGCTGGC GGTGATCGGC
GGCCTGATCT TCTCGACGGT GCTGTCGCTG ATCTTCGTGC CCGCGATGTT CATGATGATG
GACGATGTCG GCCGGCTGTT CTGGCGGTTC GGCAAATTGC TGCTCACCCA TCACGGCGAC
GACGAAGATA CCGGCAGGAC GCCCGGCCCG CCCGCGCCGC CGAACCCCAC GCCCGCGCCG
GCCACAGCCG CGCCGGCCAG CGTCGCGCCG GCGAAGAGCC TGTCGTTCTG GCGAAGCAAG
TAA
|
|---|
| Protein sequence | MGLNVSSWSI RHPLPSIVFS IILLALGWIS FTKLAVTRLP SADIPVISVA VAQFGAAPAE
LEAQVTKTIE DGVSGVEGVR HIASSITDGL SVTTIQFALE TNTDRALNDI KDAITRVRSN
LPQNVNEPLI QRVDVIGLPI LTYAAISPGK TPEQLSWFVD DVVKRALQGV RGVAQVERIG
GVEREILVSL DPDRLKAAGL TALDVSRRLR GTNVDLAGGR AEIGRNDQAI RTLAGAKTLN
DLAGTMISLP SGGEIRLDDL GTVTDTIADR RTFARVNGEP VVALGIKRSK GASDVVVAEA
VQKRIEALKA QHSDVDLKLI DTSVDYTKGN YEAAISTLFE GAILAVIVVF LFLRDLRATV
IAAISLPLSI FPAFWAMDML GFSLNLVSFL AITLSTGILV DDAIVEIENI VRHMRMGKSP
YQAAIEAADE IGLAVIAISL TIIAIFAPAS FMSGIAGQFF KQFGITVSVQ VFFSLLAARF
ITPVLAAYFL KNVSHEEKPP GRVLQAYTRM VTWSVKHYYL TVLMGLGVFA ASIWSIVLLP
QGFLPAQDTA RSVMAMELPP GTQIRTTEKT TERIVTLLRQ RPEVRSVFVD GGRVPPGIQE
VRRASLIINY TPKGDRKITQ RDLELAISKD LDQIPDIRYW FLDENGLRAI SLVVTGADSN
IVNNVAQELA AQMKRIPIIS NVISETSLDR PELRIQPRAD LAARLGVSTE SLSETIRVAT
IGDVGPALAK FDAGDRLVPI RVQLEDGARG ELGVLEQLQV PIFGGRGSVP LSVVADIKFD
QGPTSINRYD RERQATVAAD LVGNAALGDA TKLINDLPVM KSLPKGVRVS PSGDAESLNE
LSDGFATAIS AGLMMVYAVL VLLFGTFLQP ITILFSLPLS IGGAIAALLV TGKQLTTPVW
IGILMLMGIV TKNAIMLVEF ALEAIREGKP REAAMIDAGQ KRARPIVMTT IAMVAGMVPS
ALAFGAGGEF RSPMALAVIG GLIFSTVLSL IFVPAMFMMM DDVGRLFWRF GKLLLTHHGD
DEDTGRTPGP PAPPNPTPAP ATAAPASVAP AKSLSFWRSK
|
|---|
| |