Gene RPB_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0881 
Symbol 
ID3909061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1008512 
End bp1009675 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content70% 
IMG OID637882774 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_484503 
Protein GI86748007 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.427162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.92514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGC CGCCGCTGTT CCGCCCGTTC ACCTTGCGCG GCATCACCGC CAAGAACCGC 
ATCCTGATCT CGCCGATGTG CCAGTACTCG GCGGTCGACG GCGTCGCCAA CGACTGGCAC
CTCGTCCATC TCGGCAAGTT CGCCCAAGGC GGCGCCGGCA TCGTGATGGT GGAAGCCACC
GCTGTCACGG CCAATGGCCG TATCACCCAT GGCGACCTCG GGCTGTGGCA CGACGGCCAG
ATCAAGCCGC TGGAGCGGAT CGCCGCGTTC CTGCGCGACA ATGGCGCGGT GCCGGCGATC
CAGCTCGCCC ATGCCGGGCG CAAGGCCAGC ATGCAGCGAC CGTGGTACGG CAACGCCGCG
CTCACCGCGG AAGATCGCGC GCGCGGCGAC GAGCCGTGGC CGATCGTCGC GCCGAGTTCG
GTGCCGATGG AGGACGGCTG GCTGATGCCG CAGGAACTGT CCGAAGATCA GCTCGACGAC
CTGCTCGAGG CCTGGCGCGC CGCGACGCTG CGCGCGGTCG AGGCCGGCTT CGAAATGCTC
GAAGTGCATT GCGCCCACGG CTATCTGCTG CATTCGTTCC TGTCGCCGCT GTCCAACATG
CGGACCGACG CTTACGGCGG CAGCCGCGCC GGGCGAATGC GGTTTCCGTT GCAGGTGATC
GAGACGGTGC GCGCCGTCTG GCCCGCCCCG CTGCCGCTGG CGGTGCGAGT GTCGTCGGTC
GACGGGGTCG AGGGCGGCAT CGAGCTCGCC GATTCGGTGG TGTTCGCGCG CGAGGCCAAG
GCGCGGGGCG CCGACATCAT CGACTGCTCG TCGGGCGGGC TGCTCGGCTC GGCCACCGCG
GCGCGCATTC CGCGGGGCTA TGGCTTCCAG GTGCCGTTCG CCGAGACCAT CCGCAAGGAA
GCCGAGATTC CGACCATCGC GGTCGGGCTG ATCCTGCATC CGGACCAGGC GGAATCGATC
GTCGAGCAGG GCCAGGCCGA TCTGGTCGCG ATCGGCCGCG AGGCGCTGTT CGATCCGAAC
TGGACGCTGC ACGCCCAGCT CGAACTCACC GAGGACGACG AGGTGTTCGC CGACTGGCCG
AAGCAATATG GCTGGTGGCT GGAACGCCGC GAGGCGGGGC TGCGCAAGCT CGAAGGCCGC
AAGCTGCCGC ACCGGCGGGG GTGA
 
Protein sequence
MSQPPLFRPF TLRGITAKNR ILISPMCQYS AVDGVANDWH LVHLGKFAQG GAGIVMVEAT 
AVTANGRITH GDLGLWHDGQ IKPLERIAAF LRDNGAVPAI QLAHAGRKAS MQRPWYGNAA
LTAEDRARGD EPWPIVAPSS VPMEDGWLMP QELSEDQLDD LLEAWRAATL RAVEAGFEML
EVHCAHGYLL HSFLSPLSNM RTDAYGGSRA GRMRFPLQVI ETVRAVWPAP LPLAVRVSSV
DGVEGGIELA DSVVFAREAK ARGADIIDCS SGGLLGSATA ARIPRGYGFQ VPFAETIRKE
AEIPTIAVGL ILHPDQAESI VEQGQADLVA IGREALFDPN WTLHAQLELT EDDEVFADWP
KQYGWWLERR EAGLRKLEGR KLPHRRG