Gene RPB_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0868 
Symbol 
ID3909126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp997027 
End bp997608 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content64% 
IMG OID637882761 
ProductDedA family 
Protein accessionYP_484490 
Protein GI86747994 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAC GAATCTACGA CTGGTGCATC GACGCCGCCC ACAAGCCCTA CGCCCTCTGG 
ATCCTGGCGA TGGTCTCCTT CGCGGAGAGC TCGTTCTTTC CGATCCCGCC GGACGTGATG
CTGATCCCGA TGTCGCTGGC GCGGCCGGAG CGCGCGTGGT TCTACGCCGC GCTGTGCACC
GTCACCTCGG TCCTCGGCGG CGTGGTCGGC TATGCGATCG GCGCGCTGCT CTACGACTCG
GTCGGCCACT GGCTGATCCA GCTCTACGGC TATGGCGACA AGGTCGAGAC CTTCCGCGCC
GGCTATGCGG AATGGGGCGC CTGGATCATC CTGCTGAAGG GCCTCACCCC GATCCCCTAC
AAGCTCGTCA CCATCACCTC CGGCTTCGCC GGCTACGACA TCTGGCTGTT CATCCTGTTC
TCGATCATCG CCCGCGGCGG CCGTTTCTTC GTGGTTGCGA TCGTGCTCAA CCGTTACGGC
GTGGTGATCC GCGAGCAGAT CGAAAAGCGG CTGACGATGT GGGTCACGAT CGGTGCGGTG
GTGCTGGTGC TCGGCTTCGT CGTCGCGGTC AAGCTGGTGT GA
 
Protein sequence
MLRRIYDWCI DAAHKPYALW ILAMVSFAES SFFPIPPDVM LIPMSLARPE RAWFYAALCT 
VTSVLGGVVG YAIGALLYDS VGHWLIQLYG YGDKVETFRA GYAEWGAWII LLKGLTPIPY
KLVTITSGFA GYDIWLFILF SIIARGGRFF VVAIVLNRYG VVIREQIEKR LTMWVTIGAV
VLVLGFVVAV KLV