Gene RPB_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0853 
Symbol 
ID3909111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp978425 
End bp978907 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID637882746 
ProductFerritin and Dps 
Protein accessionYP_484475 
Protein GI86747979 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC GCCCCCAGAT CAATATCGGC ATCTCCGAGA AACATCGCGG CAAGATCGCC 
GACGGGCTGT CCCGGCTGCT GGCGGACTCC TACACGCTGT ATCTGATGAC GCACAATTTC
CACTGGAACG TCACCGGGCC GATGTTCAAC ACGCTGCATG CGATGTTCAT GGCGCAATAC
ACCGAGCAGT GGACCGCGCT GGATCAGATC GCCGAGCGCA TCCGCGCGCT GGGTTTTCCG
GCGCCCGGCA CCTACAAGGA ATTCGTCAAG CTGGCCTCGA TCGCCGAAGT CGAAGGTCAG
CCGAAGGCGC TGGACATGGT GCGGCACCTG GTGTCGGCGC AGGAAGCCAC CGCGCGCACC
GCGCGCGAAC TGTTTCCGAT CGTCGGCGAG GCCAACGACC AGCCGACCGC CGATCTGCTG
ACCCAGCGGC TCGACGTCCA CGAAAAGACC GCGTGGATGC TGCGCAGTCT GCTCGAAGAC
TGA
 
Protein sequence
MKKRPQINIG ISEKHRGKIA DGLSRLLADS YTLYLMTHNF HWNVTGPMFN TLHAMFMAQY 
TEQWTALDQI AERIRALGFP APGTYKEFVK LASIAEVEGQ PKALDMVRHL VSAQEATART
ARELFPIVGE ANDQPTADLL TQRLDVHEKT AWMLRSLLED