Gene RPB_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0852 
Symbol 
ID3909110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp977801 
End bp978370 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content69% 
IMG OID637882745 
Producthypothetical protein 
Protein accessionYP_484474 
Protein GI86747978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCG ATTCCCAATG CGATCTCGCG GCGCTGGTCT ACGACCCCGG CGACGATCCC 
GACGCGCTGC TCCACGGCTT CGCGGCCGAT CTCAATGCGC GCGGCACTCG CACCGTCGGC
CTGGTGCAGT TCGCGCATCG CGTGGCGGAC GTGCCGCAAT TGTCGGCGAC GCTGCTGCAC
AGCGGCGAGC AACTGCCGCT GTATCAGAAC CTCGGTTCGC AGGCGTCCGG CTGCCGGCTC
GATCCCGGCC AGCTACTGGC GGCCGGCGGC CGCGTCGGCA CGGCGATCGG CCAGGGCGCC
GACCTCGTCA TCATCAACCG CTTCGGCCAG CAGGAGAGCG AAGGCCGCGG GCTGCTGCAT
CTGATCGTTC AGGCGCTGAG CGCCGACATC CCGCTGGTGA TCGCGGTCCC GAACAAGCGC
TTCGACGCCT GGATCCGGTT CGCCGACGGC ATGAGCGTGC GGCTGCCCTG CGAGCGCCGG
GCGCTGGAGG CGTGGTGGTC CAACCTCTCT CCGCGCGGCA GAGGCAGTGC GCCGAACGCG
CACACCACGG TGTGCGAGGT CTACAAATAA
 
Protein sequence
MTFDSQCDLA ALVYDPGDDP DALLHGFAAD LNARGTRTVG LVQFAHRVAD VPQLSATLLH 
SGEQLPLYQN LGSQASGCRL DPGQLLAAGG RVGTAIGQGA DLVIINRFGQ QESEGRGLLH
LIVQALSADI PLVIAVPNKR FDAWIRFADG MSVRLPCERR ALEAWWSNLS PRGRGSAPNA
HTTVCEVYK