| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0843 |
|---|
| Symbol | |
|---|
| ID | 3909101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 958833 |
|---|
| End bp | 959681 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637882736 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484465 |
|---|
| Protein GI | 86747969 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.950445 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCA AGGTTTTGGA CGCCAGGGTT CACGACGCGC CGCATCCGTT CGACGTCGCG
ACGCGGGTTG AATGCGCCGA CGGCCGCTGG CAGGGCGCGA CCAGCGACGA CTACCACGCC
TTCGTCGGTC AGTTCGGCGG CGCCACCACC GCGACGCTGC TGCGCGCCTT GATGCAGCAT
CCCGAGCGCG CCGGCGATCC GCTGGCGCTG ACGGTGAATT TCTGTGCGCC GGTCGGCAAC
GGCGCATTCG ATCTGGCGCC GCGGCTGATC AAGGCGACCC GCTCCACGCA GCACTGGTCG
ATCGACCTGA CGCAGCCCGA GGTCGGCGTC GCGGCGTTCG CCGCGGCCGT GTTCGCGCAG
CGCCGCGAGA CCTGGTCGCA CCAGCCGACC GAGATGCCGC AAACGCCGCG CTATGAGGAC
TCCCCGGTGT ATGGACGCGC CGGCGTCGCC GCCTCCTGGA TCCGGCAATT CGAATTCCGC
TTCGCCGAGA ACGCGCCGAA CTTCACCGGC ACGCCACACG TGGAGCCGGC GAGCGCCCAC
ACCAAGGTCT GGATCGGCCA CGCCGTGCCG CGGGTGATCG ACCTGCTGTC GCTGTCGGCG
ATCGCGGACG CGTTCTTCGC GCGGATCTTC CACGTCCGCG GCGAATTGCT GCCGATCGGC
ACGGTGTCGA TGACGACGTA TTTCCATGTC GACGCCGCGG ACCTCGCCGC CGAGCCGATC
ACCGCCGTGC TCGGCGTCGC CGACGCCAAC GTGTTTCACA AGAGCTTCAG CGATCAGACC
GGGGAACTGT GGTCTGCCGG CGGGCGTTTG CTGGCGACCA CGCATCAGAT CACCTATTTC
AAGGCCTGA
|
|---|
| Protein sequence | MDAKVLDARV HDAPHPFDVA TRVECADGRW QGATSDDYHA FVGQFGGATT ATLLRALMQH
PERAGDPLAL TVNFCAPVGN GAFDLAPRLI KATRSTQHWS IDLTQPEVGV AAFAAAVFAQ
RRETWSHQPT EMPQTPRYED SPVYGRAGVA ASWIRQFEFR FAENAPNFTG TPHVEPASAH
TKVWIGHAVP RVIDLLSLSA IADAFFARIF HVRGELLPIG TVSMTTYFHV DAADLAAEPI
TAVLGVADAN VFHKSFSDQT GELWSAGGRL LATTHQITYF KA
|
|---|
| |