Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0836 |
Symbol | |
ID | 3909094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 950796 |
End bp | 951518 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637882729 |
Product | hypothetical protein |
Protein accession | YP_484458 |
Protein GI | 86747962 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.891978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.379406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCGC GTCCTGCCCA GTTTCCGTCC GACCAACGCC AGGCCAGACC GATGCGCCGA TTCGGATTCG TGCGCGCGGC GGTCGCGGCG GTGCTGGGGC TCGGCGTGCT CGGGGTCGGC GGCTTCGCCG CCTTCCTGCT GCAGCTCCGC GTCGAGGAAT CCAGACCGTC CCGAGCCGCC GACGGCATCG TGGTCCTGAC CGGCGGGTCG TCGCGGGTAT CGGATGCCGT CGACCTGCTC GCCTCGGGCT ACGGCAAGCG GCTGCTGATC TCCGGCGTGC ACAGGACGAG CGGCGCCAGC GAGATCTCGC GCTCGGTGCC GGACAGCAAG GACTGGCTCG GCTGTTGCGT CGATCTCGAC CGCTCCGCCT TCAACACCCG CAGCAACGCC GCCGAAACGA GGCGCTGGGC GCACGAGCGC GGCTTCCGCT CGCTGATCGT CGTCACCTCG AATTACCACA TGCCGCGCGC GATTGCCGAA ATGTCGCACG CAATGCCGGA CATCGAGCTG ATCCCGTTCT CGGTGATCGG CGAGAAGTGG CGCGACGAGG CGTGGTGGAG CAGTGGCGCG ACGCTGCGGC TGCTGCTATC CGAATACGCC AAATACGTCG CCGTCGAAGC GCGGGTGCGG CTGGCGCGAC TGGGCATCGA CATCATGCCC GAAGCCGCCG AGCAGTCGCC CGAGTCGGTG GCCCACAAAC CGGCGACGGC GCTCGCCAAC TGA
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Protein sequence | MDPRPAQFPS DQRQARPMRR FGFVRAAVAA VLGLGVLGVG GFAAFLLQLR VEESRPSRAA DGIVVLTGGS SRVSDAVDLL ASGYGKRLLI SGVHRTSGAS EISRSVPDSK DWLGCCVDLD RSAFNTRSNA AETRRWAHER GFRSLIVVTS NYHMPRAIAE MSHAMPDIEL IPFSVIGEKW RDEAWWSSGA TLRLLLSEYA KYVAVEARVR LARLGIDIMP EAAEQSPESV AHKPATALAN
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