Gene RPB_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0836 
Symbol 
ID3909094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp950796 
End bp951518 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content69% 
IMG OID637882729 
Producthypothetical protein 
Protein accessionYP_484458 
Protein GI86747962 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.891978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.379406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGC GTCCTGCCCA GTTTCCGTCC GACCAACGCC AGGCCAGACC GATGCGCCGA 
TTCGGATTCG TGCGCGCGGC GGTCGCGGCG GTGCTGGGGC TCGGCGTGCT CGGGGTCGGC
GGCTTCGCCG CCTTCCTGCT GCAGCTCCGC GTCGAGGAAT CCAGACCGTC CCGAGCCGCC
GACGGCATCG TGGTCCTGAC CGGCGGGTCG TCGCGGGTAT CGGATGCCGT CGACCTGCTC
GCCTCGGGCT ACGGCAAGCG GCTGCTGATC TCCGGCGTGC ACAGGACGAG CGGCGCCAGC
GAGATCTCGC GCTCGGTGCC GGACAGCAAG GACTGGCTCG GCTGTTGCGT CGATCTCGAC
CGCTCCGCCT TCAACACCCG CAGCAACGCC GCCGAAACGA GGCGCTGGGC GCACGAGCGC
GGCTTCCGCT CGCTGATCGT CGTCACCTCG AATTACCACA TGCCGCGCGC GATTGCCGAA
ATGTCGCACG CAATGCCGGA CATCGAGCTG ATCCCGTTCT CGGTGATCGG CGAGAAGTGG
CGCGACGAGG CGTGGTGGAG CAGTGGCGCG ACGCTGCGGC TGCTGCTATC CGAATACGCC
AAATACGTCG CCGTCGAAGC GCGGGTGCGG CTGGCGCGAC TGGGCATCGA CATCATGCCC
GAAGCCGCCG AGCAGTCGCC CGAGTCGGTG GCCCACAAAC CGGCGACGGC GCTCGCCAAC
TGA
 
Protein sequence
MDPRPAQFPS DQRQARPMRR FGFVRAAVAA VLGLGVLGVG GFAAFLLQLR VEESRPSRAA 
DGIVVLTGGS SRVSDAVDLL ASGYGKRLLI SGVHRTSGAS EISRSVPDSK DWLGCCVDLD
RSAFNTRSNA AETRRWAHER GFRSLIVVTS NYHMPRAIAE MSHAMPDIEL IPFSVIGEKW
RDEAWWSSGA TLRLLLSEYA KYVAVEARVR LARLGIDIMP EAAEQSPESV AHKPATALAN