Gene RPB_0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0830 
Symbol 
ID3909088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp944281 
End bp944661 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content65% 
IMG OID637882723 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_484452 
Protein GI86747956 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA CGACGCACGA CAAGGGGCTC GAGATCCGCA AGGCGGTGCT GGGCGAAGCC 
TATGTCGAAA ACGCGCTGAA GAACGCCGAC GACTTCAACA AGCCGTTCCA GGAAATGGTC
ACCGAATATT GCTGGGGCGC GATCTGGGGC CGCGAGGAAC TGCCGCGCAA GACCCGCAGC
ATGCTCAATC TGGCGATGAT CGCGATCCTG AACCGGCCGC ACGAACTGCG CGTGCACATC
AAGGGCGCGC TGACCAACGG CGTCAGCCGC GACGAGATCC GCGAGATCTT CATGCAGGTC
GCCTGCTACG CGGGGGTCCC CGCGGGCGTC GACAGCTTCC GCCTCGCCCG CGAGGTGTTC
GCGGAGGTCG ACAAGGGCTG A
 
Protein sequence
MDKTTHDKGL EIRKAVLGEA YVENALKNAD DFNKPFQEMV TEYCWGAIWG REELPRKTRS 
MLNLAMIAIL NRPHELRVHI KGALTNGVSR DEIREIFMQV ACYAGVPAGV DSFRLAREVF
AEVDKG