Gene RPB_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0820 
Symbol 
ID3909635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp935700 
End bp936650 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content67% 
IMG OID637882713 
Productelectron transfer flavoprotein, alpha subunit 
Protein accessionYP_484442 
Protein GI86747946 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGC TGCTGATTGC CGAACACGAC CACGCTCAGC TCAAGGATGC GACCAACAAG 
GCGCTGACCG CGGCAGCCGC TCTCGGCGCC GAGGTTCACG TCCTGGTCGC CGGTGGTGGC
GAGGGCACCA AGGCGGCCGC CGAAGCCGCT GCGAAGCTGC AGGGCGTCGC CAAGGTGCTG
CTGGCGGATG CGCCGCTCTA TGAGCACGAT CTCGCCGAGC CGCTGGCGGC GCTGATCGTG
TCGCTGGCGC CGAACTACGA CGCGATCGTC GCGCCCGCGA CCTCGCGCTT CAAGAACGTG
ATGCCGCGCG TCGCCGCTTT GCTCGACGTC ATGCAGGTGT CGGAGATCAT CAAGGTGATC
GCGCCCGACA CCTATGAGCG GCCGATCTAT GCGGGCAACG CGATCCAGAC CGTGAAGTCG
AAGGACGCCA AGAAGGTGAT CACGGTCCGC ACCTCGACCT TCCAGGCGAC CGGCGAGGGC
GGCAGCGCCG CGATCGAGCC GGTGGCGGCT GCGGCGGATC CGGGCCTCTC CACCTTCGTC
GGCGAGGAGG TCGCCAAGAG CGACCGTCCG GAACTGGCCT CGGCCAAGAT CATCGTCTCC
GGCGGCCGCG CGATGCAGAG CCGCGAGAAC TTCACCAAAT ACATCGAGCC GCTCGCCGAC
AAGCTCGGCG CCGGTGTCGG CGCCTCGCGC GCCGCGGTCG ATGCCGGCTA CGCGCCGAAC
GACTGGCAGG TCGGCCAGAC CGGCAAGGTG GTGGCGCCGG AGCTGTACAT CGCGATCGGC
ATTTCCGGCG CGATCCAGCA TCTCGCCGGC ATGAAGGACT CCAAGGTGAT CGTCGCGATC
AACAAGGACG AAGACGCGCC GATCTTCCAG GTCGCCGATT ATGGTCTGGT CGCCGATCTG
TATCAGGCGG TACCGGAACT GACCGACGAA CTGGGCAAGC TCGGCAAGTA G
 
Protein sequence
MATLLIAEHD HAQLKDATNK ALTAAAALGA EVHVLVAGGG EGTKAAAEAA AKLQGVAKVL 
LADAPLYEHD LAEPLAALIV SLAPNYDAIV APATSRFKNV MPRVAALLDV MQVSEIIKVI
APDTYERPIY AGNAIQTVKS KDAKKVITVR TSTFQATGEG GSAAIEPVAA AADPGLSTFV
GEEVAKSDRP ELASAKIIVS GGRAMQSREN FTKYIEPLAD KLGAGVGASR AAVDAGYAPN
DWQVGQTGKV VAPELYIAIG ISGAIQHLAG MKDSKVIVAI NKDEDAPIFQ VADYGLVADL
YQAVPELTDE LGKLGK