| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0812 |
|---|
| Symbol | |
|---|
| ID | 3909627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 929064 |
|---|
| End bp | 929417 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637882705 |
|---|
| Product | photosynthetic reaction center protein |
|---|
| Protein accession | YP_484434 |
|---|
| Protein GI | 86747938 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.212704 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGG AAACAAGCGA GACCGTCAGC CTGATCGGCA GCGACAAGGT GCAGGGAACC
GCCGTCTACG GCGCCGACGG CGAGAAGATC GGCAGCATCG AACGGGTGAT GATCGAGAAG
GTCAGCGGCA AGGTGTCCTA CGCCGTCTTG AGCTTCGGCG GCTTCCTCGG CATCGGCGAC
GATCACTACC CGTTGCCCTG GCCGTCGCTG AAGTACAATG TCGACCTCGG CGGCTACCAG
ACGATGATCA CCAACGATCA GCTGCAGAAC GCGCCGCACT ACGGCCGCGA CGACGAATAC
GACTGGAAGC GGGCCCGCAA GGTCGACGAC TATTACGGCG TCACGCTGAG CTGA
|
|---|
| Protein sequence | MTPETSETVS LIGSDKVQGT AVYGADGEKI GSIERVMIEK VSGKVSYAVL SFGGFLGIGD
DHYPLPWPSL KYNVDLGGYQ TMITNDQLQN APHYGRDDEY DWKRARKVDD YYGVTLS
|
|---|
| |