| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0810 |
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| Symbol | |
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| ID | 3909625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 925461 |
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| End bp | 927083 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882703 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_484432 |
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| Protein GI | 86747936 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.553058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGA CCAAAGAGAC GAGCCCGTCC TGGTGGGCGG CCGGTGCGCT GTATCAGATC
TATCCCCGCT CGTTTCAGGA CTCCGATTCC GACGGCATCG GCGATCTGCG CGGCATCATC
GATCGGCTGG ATCATTTGTC GGATCTCGGC GTCGACGCGC TGTGGCTGTC GCCGATCTTT
CCGTCGCCGA TGGCGGATTT CGGCTACGAC GTCGCCGACT ATGTCGGGAT CGATCCGATC
TTCGGCACCA TGGATGATTT CGACGCGCTG GTGCTGACCG CGCATGCGCG CGGACTCAAG
GTGATTCTCG ACCTGGTGCC GAACCATTCG TCCGACCAGC ACCCGTGGTT CGTCGAAAGC
CGGTCCTCGC GCGACAATCC GAAACGCGAC TGGTATCTGT GGCGAGATCC CGCGCCGGAC
GGCGGACCGC CGACCAACTG GCTGTCGGAA TTCGGCGGCA GCGGCTGGGA ATACGACGAT
GCCACCGGCC AGTATTATTA TCACGCCTTC CTCAAGCAGC AGCCCGACCT CAACTGGCGC
AATCCGCAGG TGCGCGCAGC GATCTACGAT GCGATGCGGT TCTGGCTGAA GAAGGGCGTC
GACGGCTTCC GCGTCGACGT GATCTGGCAC CTGATCAAGG ACGATCGATA TCGCGACAAC
CCGCCCAATC CGGAGTTCAG GCCCGGCCTG CCGCCGCACG CCGCCTTGCT GACGGCGTAT
TCGGCCGATC GGCCGGAGAC GCAGGAGATC GTCGCGCAGC TGCGCGCGGT GTGCGACGAG
TTCGATCAGC GCCTGCTGAT CGGCGAGATC TATCTGCCGA TCGAGCGGCT GGTGGCGTAT
TACGGCGCCG ATCTGCGCGG CGCGCATCTG CCGTTCAACT TCGCGCTGCT GTCGACGCCG
TGGCGCGCGC ACGACATCGC GGCGCTGATC GATCGCTACG AGGCGGCGCT GCCGCCGGGC
GCGTGGCCGA ACTGGGTGCT CGGCAATCAC GACCGGCCGC GGGTGGCGAG CCGCGTCGGT
CCTGCGCAGG CCCGCGTTGC CGCGATGCTG CTGCTGACGC TGCGCGGCAC GCCGACGCTG
TATTACGGCG ACGAGCTCGG CATGGAGCAG GTCGACATCG CGCCGCAGGA CGTGCAGGAC
CCGTTCGAGA AGAACGTGCC GGGCATCGGG GTCGGCCGCG ACGGCTGCCG CACGCCGATG
CCGTGGGATT CCTCGCCGAA CGCCGGCTTT TCCGACGCGA AGCCATGGCT GCCGCTGGGG
CCCGACGCGG CGCAGGACAA CGTCGCCAAT CTGCGCGCCG ACGCGCAGTC GATCCTCAAT
CTGTATCGCG CGCTGCTGCG GCTGCGCCGC GCCCGGCCGC AATTGTCGCT CGGTGATTAT
CAGCCGCTCG CGGTGCAGGG CGAGCTGCTG CTGTATCGCC GCTGTCATCA GGGCGAATCG
GTGCTGATCG CACTCAATCT CGGCGCCGCG CCGGTGTCGG CGGCGTCCGA TGCGTTCGGG
CTCGACGGCG AGGTGCTGCT GTCGACCCTC ATGGACCGCG CCGGCGAACG CGTCGGCGCC
ACGCTCGATC TGCGCGGCCA CGAGGGCGTC ATCATCGGCC GCGCGCCCGA GCCGGTGGTG
TAG
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| Protein sequence | MPMTKETSPS WWAAGALYQI YPRSFQDSDS DGIGDLRGII DRLDHLSDLG VDALWLSPIF
PSPMADFGYD VADYVGIDPI FGTMDDFDAL VLTAHARGLK VILDLVPNHS SDQHPWFVES
RSSRDNPKRD WYLWRDPAPD GGPPTNWLSE FGGSGWEYDD ATGQYYYHAF LKQQPDLNWR
NPQVRAAIYD AMRFWLKKGV DGFRVDVIWH LIKDDRYRDN PPNPEFRPGL PPHAALLTAY
SADRPETQEI VAQLRAVCDE FDQRLLIGEI YLPIERLVAY YGADLRGAHL PFNFALLSTP
WRAHDIAALI DRYEAALPPG AWPNWVLGNH DRPRVASRVG PAQARVAAML LLTLRGTPTL
YYGDELGMEQ VDIAPQDVQD PFEKNVPGIG VGRDGCRTPM PWDSSPNAGF SDAKPWLPLG
PDAAQDNVAN LRADAQSILN LYRALLRLRR ARPQLSLGDY QPLAVQGELL LYRRCHQGES
VLIALNLGAA PVSAASDAFG LDGEVLLSTL MDRAGERVGA TLDLRGHEGV IIGRAPEPVV
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