Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0805 |
Symbol | |
ID | 3909620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 919005 |
End bp | 922715 |
Gene Length | 3711 bp |
Protein Length | 1236 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882698 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_484427 |
Protein GI | 86747931 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATA TCGTTCTTCT CGCGCATCGC GGCAGCAACC CCTATCCGGA TCATTCGCGC GACGCCTATG TCTGGGCGAT CGACTGCGGC GCCGACTTCA TCGAGCCGGA TCTCTATCTG ACCAAGGACG GCGTGCTGGT CTCCAGCCAC GACAACCACA ATTATTCCAA TCTGAGCTAC GCCGAGGCGA AAGCCCTCGA GCCGTCGCTG CTGACGTTCG GCGAGATCAT CGAGCTCGTG AAGGCGATGT CGATCGAGAC CGGCCGCGAC ATCGGCATCG TTCCCGAGAC CAAGAGCACC GACTACGCCA CCAGCGAAGC CGTGATCAAG GAGTTGATCG CCCACGACTT CACCGATCCG GACCGGGTCG TGATCCAGAG TTTTGCGTCG ACCAATTTGC AGCAATTGCA CGACACCATC ATGCCGCAAT ACGGCGTCGA CATCCCGCTG GCCTATCTCG GCAGCGGCAT TGCGAATCCG GGCCAGATCG CGACCTTTGC GGACTACGCC GCGCCCAGCG TCGGCTCGTT CACCGCGGCC GACGTCGCGG CCGCGCATGC CGCCGGCCTC AAGGTGGTGG CCTGGACGAT TCTCGGGGCC CGGTCCGACA TCCAGAGCCT GATCGACATG GGCGTGGACG CGGTCTTCGT CGACGATACC CGGCTCGCCC GCGCCAGCAT CGAGGCGATC GCCGGCGCCA ACGTCGTCTA CGGAACGCCG GAAATCGACG GCGCCTCCGG CACCGCCGGC AACGACGTGG TCTACGCCAT GCAGGGCGAT GACATCGTCT GGTCCGGGGC CGGCGACGAT CTGGTCTATG GCGACGGCGG CGACGACGCT CTGTTCGGCG GCGCCGGCAA CGACATCCTG GTCGGCGGTT CGGGCACCGA TCTGCTGTCC GGCGACGCCG GTCGCGACGT TCTCGACGGC GGCGCCGGCA ACGATGTCGT GCTGGCGAGC GGCGACACCG TGCTGTTCCG CCGTGGCTCG GGCATCGACC TTGTCGCGCT CGACGCCGCC AGCAGCATCG ACTTCCAGGA CATCGACTCG CGCGCCATCA CGGTGATACG CGACGGCGCC GATCTGATCG TCCGCATCGG CGACGACGCG CTGGTGATCC GTAACGGCGC CGGCAATGCC GCGAGCCTGC CCGGCGCGGT GAGTTTTGCC GACGGCGTGA CGCTCACCGC CACCGAGCTG CTGGCGCGCG CCACGAGCGG CACCGACGCC GGCGTCACCG CCGCGCTGCC GGCGCTCGAA CAGCTGCTCG CCGCTGCGCC CGATCTCGCC GTCGAGCCCC CGGTGGTCGT CGAGACCAAC CTCATCGTCA ATGGCGGCTT CGAGGATCTG ACCGGGGCCA ACAACGGAGC GAGTTGGGGC TATCGCAACA CCAATCCGGC CGGCGTCATT CCCGGCTGGG TCAACCGCGG TGACACCCGC GCGGAAGTCC ACAAGGATAC GGTCGGCGGC ATCGGCGCGG CGGAAGGAAC CTATTGGTTC GACCTGGAAG GCGCGCCCAC CAACGCCAAA CTGGTGCAGA CCGTCGCCGG CGTCGAACAG GGCGCGACCT ATCAGCTCAG CTTCAGGATC GCCGACACCG ACACCGCGCA GACGACCGAC TCCGTCAAGG TCTATTGGGG CGGCGAACTG ATCTATACGG GAACGCCGAA GAACAAGTGG CAGGAGATCA CCATCGACGT GATCGGCGGC GACGGTGACG GCTTCAACAC GCTGACCTTC GAAAGCGTGA CGCCGAGTCC GAACGGCGCC GGCGTGGCGC TCGACGACGT GGCGCTGATC CGGCTGCAGG AGAGCCCCAA TCTGATCGTG AACGGCAGCT TCGAGGACCT CACCGGCGCC AACAACGGCA ATTGGAGCGG CGATTGGGGC TACCGCAACA ACAGCGGCGT CATTCCGGGT TGGACCCAGG TCGAAACCTC CGCCGGCGGT CGCGCCGAAC TGCACTTCGA CACCCAGAAC GGCGTGTCGG CCGCGGACGG CAATGTCTGG TTCGATATGG ACGGCAACGG CAACAACGCC AGGCTGGTGC AGACCGTCGC CGGCGTCGAG GCCGGCGCCA CCTACCGGCT GACCTTTTCG ATCGCCGACG CCGACGCCAG CACCACCGAT GACGGCGTGC GCGTCTATTG GGGCGGCCAG GTCGTGTATG AAGGTGTGCC GACCAGCATC TGGCAGAAAA TCACGATCGA GGTCGTGGGC AATGCCGGCG ACGGAACCAA TCAGCTGATC TTCCAGGGCA CCGAAACCAG CCTGAACGGC TACGGCGCCG CGCTCGACGA TATTTCGCTG CGCAAGATCG CCGATGCGCC GCCGCCCAAC ACCGCGCCGG TCGCGGCCGA CGACGGCGCT CCGGCGACCG ACTTTGGTGC GGCGCTGACC ATCGCCGCCG CCACCTTGCT GGCCAATGAT ACGGATGCCG ACGGCGACGC GCTGGTGATC CTGTCGGTGG CGGCCGGCGT CGGCGGCACG GTCGCGCTGG ACGCCGACCG CAATGTCGTG TTCACCCCGG CCGAAGGCTT TTCGGGCGAG GCGTCGTTCA GCTATGTGGC ATCCGACGGC CGAGGCGGCA CCGCCACGGC GGACGTCACC GTCGTGGTGG CGCGGCGGGT GCTCTCGGGC ACGCCCGGCG ACGACGTGAT CATCAGCACG TCCGGCGACG ACGTGATCGA CGGTGGCGAT GGCGTCGATA CCGTGAGCTA TGCGGCTTCG GCCGCCGGCG TCGACGTCGA CCTTGCGGCC GGCGTCGCCT CCGGTGACGG CAACGATACG CTGTCGAGCA TCGAGTCGGT GATCGGCTCG GCGCATGACG ACCGGCTGAG CGGCAACGAC GCCGCCAACC TGCTCGACGG CGGCGACGGC GACGACATCC TGTCCGGCGG TCTCGGCAAC GACGTCCTCA ACGGCGGTCT CGGCAATGAC ATCATCACCG GCGGCGCCGG TGACGACACC ATCGACGGCG GCGCGGGCTT CGACACGCTC GACCTGTCGG AGGCCACCGG GGCGGTGACG CTCAATCTGG TGAGCGGCAC CGTCAGCGGC GCCGGCATCG GCACCGATCA CTTCAGCTCG ATCGAGAGCT TCGTGTTCGG TAGCGGCAAC GACGTTATCA CCGGCGGCAA CGGCGACGAC AGCCTCGACG GCGGCGCCGG CAACGACGCG ATCGACGGCG GCAACGGCAA TGACACGCTC TCCGGCGGCG AAGGCAACGA CGCGATCGAC GGCGGTTCGG GCAACGACAT CGTGGATGGC GGCCTCGGCA ACGACACGCT GAAGGGCGGT TCGGGCAACG ACGTCATCGC GGCCGGCGAC GGCGACGACA ATGTCGATGC CGGCTCCGGC GACGACATCG TCACCGGCGG TGCCGGCAAC GACACGCTGA AGGGCGGGTC GGGCGCCGAC ATCATCACCG GCGGCGCCGG CAACGACATC CTGACCGGCG GTTCCGGCGC GGACGTCTTC GTGTTCGCGG CCGGCTTCGG CAACGACACC GTCACCGACT TCGCCACCAC GGGGTCGTCG GCCGATCTGC TGCAGTTCTC CAGCGACATG TTCGCCGACT TCGCCGACGT GATGGCGCAC ACCGCGCAGG TCGGCAGCAG CGTGGTGGTC ACGCTGGACG CCGACACCAG CATCACGCTG GCCAACGTCC AGATGACCTC GCTCGCCGCC GACGACTTCC GCTTCGTCTG A
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Protein sequence | MSDIVLLAHR GSNPYPDHSR DAYVWAIDCG ADFIEPDLYL TKDGVLVSSH DNHNYSNLSY AEAKALEPSL LTFGEIIELV KAMSIETGRD IGIVPETKST DYATSEAVIK ELIAHDFTDP DRVVIQSFAS TNLQQLHDTI MPQYGVDIPL AYLGSGIANP GQIATFADYA APSVGSFTAA DVAAAHAAGL KVVAWTILGA RSDIQSLIDM GVDAVFVDDT RLARASIEAI AGANVVYGTP EIDGASGTAG NDVVYAMQGD DIVWSGAGDD LVYGDGGDDA LFGGAGNDIL VGGSGTDLLS GDAGRDVLDG GAGNDVVLAS GDTVLFRRGS GIDLVALDAA SSIDFQDIDS RAITVIRDGA DLIVRIGDDA LVIRNGAGNA ASLPGAVSFA DGVTLTATEL LARATSGTDA GVTAALPALE QLLAAAPDLA VEPPVVVETN LIVNGGFEDL TGANNGASWG YRNTNPAGVI PGWVNRGDTR AEVHKDTVGG IGAAEGTYWF DLEGAPTNAK LVQTVAGVEQ GATYQLSFRI ADTDTAQTTD SVKVYWGGEL IYTGTPKNKW QEITIDVIGG DGDGFNTLTF ESVTPSPNGA GVALDDVALI RLQESPNLIV NGSFEDLTGA NNGNWSGDWG YRNNSGVIPG WTQVETSAGG RAELHFDTQN GVSAADGNVW FDMDGNGNNA RLVQTVAGVE AGATYRLTFS IADADASTTD DGVRVYWGGQ VVYEGVPTSI WQKITIEVVG NAGDGTNQLI FQGTETSLNG YGAALDDISL RKIADAPPPN TAPVAADDGA PATDFGAALT IAAATLLAND TDADGDALVI LSVAAGVGGT VALDADRNVV FTPAEGFSGE ASFSYVASDG RGGTATADVT VVVARRVLSG TPGDDVIIST SGDDVIDGGD GVDTVSYAAS AAGVDVDLAA GVASGDGNDT LSSIESVIGS AHDDRLSGND AANLLDGGDG DDILSGGLGN DVLNGGLGND IITGGAGDDT IDGGAGFDTL DLSEATGAVT LNLVSGTVSG AGIGTDHFSS IESFVFGSGN DVITGGNGDD SLDGGAGNDA IDGGNGNDTL SGGEGNDAID GGSGNDIVDG GLGNDTLKGG SGNDVIAAGD GDDNVDAGSG DDIVTGGAGN DTLKGGSGAD IITGGAGNDI LTGGSGADVF VFAAGFGNDT VTDFATTGSS ADLLQFSSDM FADFADVMAH TAQVGSSVVV TLDADTSITL ANVQMTSLAA DDFRFV
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