| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0791 |
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| Symbol | |
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| ID | 3909279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 886386 |
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| End bp | 887612 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882683 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_484413 |
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| Protein GI | 86747917 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.318228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGA CCAATACGCC CAATCCGAAG CCCTCCATCG CCATCCCCGA CACCGCGCAT
TTCCGCCGCG AAACCCGGCT GGTGCATTCC GGCAGCCTGC GCTCGCAATA TGGCGAGACC
TCCGAGGCGC TGTTTCTGAC CCAGGGCTTC GTCTACGACA GCGCCGAGCA ATGCGAGGCG
CGCTTCACCG GCGACGACGC CGGCTTCCAA TATTCGCGGT TCTCCAATCC GACGGTGTTC
AGCTTCGAGC AGCGGATGGC GGAATTCGAG GGCGCCGAGG CGGCGCGCGC CACCGCCACC
GGCATGGCCG CGGTGACCGC CGCGATGCTG GCGCCGCTGC GCGCCGGCGA TCACGTCGTG
GCCTCGAAGG CGATGTTCGG CTCGTGCCGC TACGTGGTCG AGGATCTGCT GCCGCGCTAC
GGCATCGAAT CGACGCTGGT CGACGGCCTC GATCTCGACC AGTGGCAGAA GGCGCTGCGC
CCGAACACCA GGACCTGCTT CCTCGAAAGC CCGACCAATC CGACGCTCGA CGTGCTCGAC
ATCGGCGCGA TCGCCGAGAT CGCGCATGCC GGCGGCGCGC GGCTCGTCGT CGACAACGTG
TTCGCGACGC CGATCTGGCA GAGCCCGCTC GCGCTCGGCG CCGACGTCGT GGTGTACTCC
GCCACCAAGC ATATCGACGG CCAGGGCCGC TGCCTCGGCG GCGTGGTGCT GTCGACGCAG
GCGTTCATCG AGGAGCACAT CCAGATGTAT CTGCGCCAGA CCGGGCCGTC GCTGTCGCCG
TTCAACGCCT GGGTACTGCT GAAGGGGCTG GAGACGCTGG CGGTCCGGGT TCGCGCCCAG
ACTGAGACGG CGGCGGCGAT TGCCGATGCG CTGGCCGGCC ATCCGAAGAT CCCGCGGCTG
GTCTATCCCG GCCGCGCCGA CCATCCGCAG GCCGCCACGG TCAAGAAGCA GATGGGCGCC
GGCTCGACGC TGATCGGCTT CGAGGTCGCG GGCGGCAAGG CGGAAGCGTT CCGCTTCCTC
AACGCGCTGA AGCTGATCCG GATCAGCAAC AATCTCGGCG ACGCCAAGAG CCTGGTCACG
CATCCGGCGA CGACGACCCA TCAGCGGCTG AAGCCGGAAG CGCGCGCCGA ACTCGGCATC
AGCGAAGGCT TCATCCGCTA TTCGGTCGGC CTCGAGCACA AGGACGACCT GATCGAGGAC
ATCGTCGCGG CGCTGGAGAA GGTGTAG
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| Protein sequence | MSETNTPNPK PSIAIPDTAH FRRETRLVHS GSLRSQYGET SEALFLTQGF VYDSAEQCEA
RFTGDDAGFQ YSRFSNPTVF SFEQRMAEFE GAEAARATAT GMAAVTAAML APLRAGDHVV
ASKAMFGSCR YVVEDLLPRY GIESTLVDGL DLDQWQKALR PNTRTCFLES PTNPTLDVLD
IGAIAEIAHA GGARLVVDNV FATPIWQSPL ALGADVVVYS ATKHIDGQGR CLGGVVLSTQ
AFIEEHIQMY LRQTGPSLSP FNAWVLLKGL ETLAVRVRAQ TETAAAIADA LAGHPKIPRL
VYPGRADHPQ AATVKKQMGA GSTLIGFEVA GGKAEAFRFL NALKLIRISN NLGDAKSLVT
HPATTTHQRL KPEARAELGI SEGFIRYSVG LEHKDDLIED IVAALEKV
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