Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0789 |
Symbol | |
ID | 3909277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 884328 |
End bp | 885107 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882681 |
Product | hypothetical protein |
Protein accession | YP_484411 |
Protein GI | 86747915 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.161897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.103899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGCGG GCGGAATGGC CGGCTTGGGA TGGATGCTGG GCTTGGCCCT GCTCGGCGCG CTCGCGGCGC CGGCCGGCGC TGCGGCCGAG ACGTCCCCGC AGGGCTGCGA CGCGCCCGCC TATCTGCTGT CCACCGACAT CACCCTCGGC CGGGTCGCTG CCGCGCTCCG GACCGACCGC AAGCTCGACA TCCTGGTGGT CGGCAGCCGC TCCTCCAGCA TCGGCTCGGC CGAGAGCACC GCCTATCCGG CCCGGCTGCA GAGCCTGCTG CGCGACCGGC TGCCGGGCAT CGCCGTCAGC GTCACGTTCG AGATGCGGGT CAAGCGCACC GCCGCCGAGG TGGCGCCCGG GCTCGGCCAG CTCGTCGCCG AGCGCAAACC CGCGTTGCTG ATCTGGCAGA CCGGCACTTA CGATGCGATC CGTTCGATCG ACGCCGACGA CTTCCGCCGC GGGCTCAGCG AGGGCATCGA AGCCGTGCAG AAGGCCGGCG CCGACGTCGT CCTGATGAAT TTGCAATACA GCCCCCGGAT TGAAACCATG ATCAATCCGG CGCCCTATCT GGATAATATG CGGGCCGTGG CGCAGGAGCA CGACGTGCCG CTGTTCGACC GCTTCGCGCT GATGCGGCAC TGGAACGAGA CCGGAGAATT CGACCTGTTC AGTCCCTCGC CCGGAATCGA CCTGGCCATG CGGGTGCATA ATTGCCTCGC GCGGGCGCTG TCGGCCTTCG TCATCGATGC GGCGAAGATC AATCCATCGG AGCTGAGGAC GTTGCGTTAA
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Protein sequence | MRAGGMAGLG WMLGLALLGA LAAPAGAAAE TSPQGCDAPA YLLSTDITLG RVAAALRTDR KLDILVVGSR SSSIGSAEST AYPARLQSLL RDRLPGIAVS VTFEMRVKRT AAEVAPGLGQ LVAERKPALL IWQTGTYDAI RSIDADDFRR GLSEGIEAVQ KAGADVVLMN LQYSPRIETM INPAPYLDNM RAVAQEHDVP LFDRFALMRH WNETGEFDLF SPSPGIDLAM RVHNCLARAL SAFVIDAAKI NPSELRTLR
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