Gene RPB_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0789 
Symbol 
ID3909277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp884328 
End bp885107 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID637882681 
Producthypothetical protein 
Protein accessionYP_484411 
Protein GI86747915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.161897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.103899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGG GCGGAATGGC CGGCTTGGGA TGGATGCTGG GCTTGGCCCT GCTCGGCGCG 
CTCGCGGCGC CGGCCGGCGC TGCGGCCGAG ACGTCCCCGC AGGGCTGCGA CGCGCCCGCC
TATCTGCTGT CCACCGACAT CACCCTCGGC CGGGTCGCTG CCGCGCTCCG GACCGACCGC
AAGCTCGACA TCCTGGTGGT CGGCAGCCGC TCCTCCAGCA TCGGCTCGGC CGAGAGCACC
GCCTATCCGG CCCGGCTGCA GAGCCTGCTG CGCGACCGGC TGCCGGGCAT CGCCGTCAGC
GTCACGTTCG AGATGCGGGT CAAGCGCACC GCCGCCGAGG TGGCGCCCGG GCTCGGCCAG
CTCGTCGCCG AGCGCAAACC CGCGTTGCTG ATCTGGCAGA CCGGCACTTA CGATGCGATC
CGTTCGATCG ACGCCGACGA CTTCCGCCGC GGGCTCAGCG AGGGCATCGA AGCCGTGCAG
AAGGCCGGCG CCGACGTCGT CCTGATGAAT TTGCAATACA GCCCCCGGAT TGAAACCATG
ATCAATCCGG CGCCCTATCT GGATAATATG CGGGCCGTGG CGCAGGAGCA CGACGTGCCG
CTGTTCGACC GCTTCGCGCT GATGCGGCAC TGGAACGAGA CCGGAGAATT CGACCTGTTC
AGTCCCTCGC CCGGAATCGA CCTGGCCATG CGGGTGCATA ATTGCCTCGC GCGGGCGCTG
TCGGCCTTCG TCATCGATGC GGCGAAGATC AATCCATCGG AGCTGAGGAC GTTGCGTTAA
 
Protein sequence
MRAGGMAGLG WMLGLALLGA LAAPAGAAAE TSPQGCDAPA YLLSTDITLG RVAAALRTDR 
KLDILVVGSR SSSIGSAEST AYPARLQSLL RDRLPGIAVS VTFEMRVKRT AAEVAPGLGQ
LVAERKPALL IWQTGTYDAI RSIDADDFRR GLSEGIEAVQ KAGADVVLMN LQYSPRIETM
INPAPYLDNM RAVAQEHDVP LFDRFALMRH WNETGEFDLF SPSPGIDLAM RVHNCLARAL
SAFVIDAAKI NPSELRTLR