| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0770 |
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| Symbol | |
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| ID | 3909258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 863164 |
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| End bp | 863970 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882662 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_484392 |
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| Protein GI | 86747896 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.823141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCACA ATCTGTTTTC GCTGGAGGGC CGCGTCGCCC TGGTGACCGG CGGCTCGCGC
GGCATCGGCA AGATGATCGC CTCGGGCTTT CTCGCTTACG GCGCGTCACG GGTCTACATC
ACCGCGCGCA AGGCCGCGGC CTGCGAAGCC ACCGCGGCGG AATTGACCGC GCAGCATTCC
GGCGACTGCA TCGCGCTGCC GATCGACATC TCCACCATGA CCGGCATCGA CATGCTGGCC
GGCGAGATCA AGAAGCGCGA ACCGAAGCTC GACATTCTGG TCAACAATGC CGGCGCCGCC
TGGGCGGCCG ACTTCGATGA ATTCCCGGAG GCCGGCTGGG ACAAGGTGAT GGACCTCAAC
GTCAAGACGC CGTTCTTCCT CACCAAGGCG CTGCACGGCC CGCTGCGCGC CGCCGCCACC
GCCGAGCGCC CCGGCAAGGT GATCAACATC GCCTCGATCG ACGGCATCTT CGTCAATCCG
CTCGAGACCT ATCCGTATGC GGCCTCGAAA GCCGGACTGA TCCACCTGAC GCGGCGGATG
GCGGTGCGGC TGATCAAGGA CCACATCGTG GTGACGGCGA TCGCGCCGGG CCCGTTCGCG
TCGGACATGA ACAAGGCCGC CCGCGACGAG GCCGAGGCGG TGGCCGGCCG CGTGCCGGCC
GGCCGGATCG GCACCGACGA GGACATGGCC GGCACCGCGA TCTACCTGGC GTCGCGCGCC
GGCGACTACG TCGTCGGCAC CACCATCGCC GTCGACGGCG GCGTCGCCTA CGCCAACCCG
GGCATCAAGG GCGACGGCTG GGCTTAA
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| Protein sequence | MFHNLFSLEG RVALVTGGSR GIGKMIASGF LAYGASRVYI TARKAAACEA TAAELTAQHS
GDCIALPIDI STMTGIDMLA GEIKKREPKL DILVNNAGAA WAADFDEFPE AGWDKVMDLN
VKTPFFLTKA LHGPLRAAAT AERPGKVINI ASIDGIFVNP LETYPYAASK AGLIHLTRRM
AVRLIKDHIV VTAIAPGPFA SDMNKAARDE AEAVAGRVPA GRIGTDEDMA GTAIYLASRA
GDYVVGTTIA VDGGVAYANP GIKGDGWA
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