| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0759 |
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| Symbol | |
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| ID | 3909247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 852802 |
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| End bp | 853473 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882651 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_484381 |
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| Protein GI | 86747885 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.777163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCACG CTCTCCACAC CGAACCGGTC GACACGCTCG CAACGCCGCC GGCCGCATCG
GCGACGCTCG CACCCGATGC GATCGTGCCG CACGACCCTG ACGCGCCGCG CGACATCGAC
GAAGAATTGC TGGACCGGCT CGCGGCGAAC GACGAGGCGG CGTTCAGGCT GCTGGTCGAG
CGCCACATCG ATCGCGCCTT CGGCATCGCG CTGCGCCTGC TCGGCAGCCG CGCCGACGCC
GAGGACGTGG TGCAGGACAC GATGCTGAAA GTCTGGACCC ATCGCGGCCG CTGGGAGCAC
GGCCGCGCCA AATTCTCGAC CTGGCTGTAC CGCGTCGTCA CCAATCGCTG CATCGATCTG
CATCGCCGTC CGCGCACCGA CAATGTCGAT GCCGTGCCCG AGCCGGCCGA CGCCAAGCCC
GACGCCTGCA GCACCATGCA GCGCAACGAG ATCACCCAAT TGCTGGAAAC CGCGATTCAG
AAACTGCCCG AGCAGCAGCG CGTCGCGGTG ATCCTGTCGT ATCACGAGAA CATGAGTAAC
GGCGACATCG CCGAGGTGAT GAGCACGACC GTCGCCGCGG TCGAGTCGCT GCTCAAGCGC
GGGCGTCAGC AGCTCCGCGA GATCCTGCGG CGCCACGAGC CGGACCTGCT GCAGGCGTTT
ACCGACTGCT AA
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| Protein sequence | MAHALHTEPV DTLATPPAAS ATLAPDAIVP HDPDAPRDID EELLDRLAAN DEAAFRLLVE
RHIDRAFGIA LRLLGSRADA EDVVQDTMLK VWTHRGRWEH GRAKFSTWLY RVVTNRCIDL
HRRPRTDNVD AVPEPADAKP DACSTMQRNE ITQLLETAIQ KLPEQQRVAV ILSYHENMSN
GDIAEVMSTT VAAVESLLKR GRQQLREILR RHEPDLLQAF TDC
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