| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0758 |
|---|
| Symbol | |
|---|
| ID | 3909246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 849855 |
|---|
| End bp | 852290 |
|---|
| Gene Length | 2436 bp |
|---|
| Protein Length | 811 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637882650 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484380 |
|---|
| Protein GI | 86747884 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5610] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTAC ACATTGCGGA AACAAATCGA TTCAAGCCGA AATATTCCGA CGCAAACTTC
GTCTCGTTCG ACGTCTTCGA TACTTTCATC GTGCGCGGCT GCACGACGCC CGACGGCGTG
ATCGAGCGGG CGTTTCAATC GTCGCCTGCG GCGAACCGCT TTCCCGCCGC GGCTGGATCC
TACGTCGAAC ATCGCAGGCA GGCCGAAGCC CGCGCGCGCA AGGCGGCGAT CCGCAACGAC
GGCCGCGCCG AAATCGGCAT CGCCGAGATC TATGCGGTGT TTCCGTTCCG GCTGTTCGGC
CTGTCCAAAG AGGCGCTGCC GCACCTCGTC GCCGCCGAGT TCGCGGCCGA GCACGAATTG
TGCCGCTGCA ATCCGGATAT TCTCGCGCGG TATCGCGAAC TCCGTGCCGC CGGCGCGCGT
ACCGGCTTCA TCTCCGACAG CTATTGGAGC GCCGAGCAGC TGGCATCGCT GCTGCGTGCG
TGCTGCCCGG ACCTCCAATG GGACTTTCTG TATTCGTCGA GCGACAGCGG CACCGGCAAG
GCCGAGAAGT TATTCGGGAT CTATCTCGCC GAGCATGCGG TCGACCCGCG GCGCGCGGTC
CACATCGGCG ACAATCCGAT CGCCGACATC GACGGCGCGC GGCGGTTCGA CATCAGCGCG
CTGCACGTCC CTCAGGCGAG CGCGCAGCTG GCGGCGATCT TCAATCGCGA GGCGCCGGCC
GGTCGATTGT TGTGCCAGGC GCCGGTCGGA ACGCTGGACG GCGGCGTGCG CACGCTGCGG
CGGCTGGTGG CCGCGCGCGT GCCGCGGCGA TCTCCCGCGT TCGATTTCGG CGCCGACGTG
CTCGGGCCGG TGATGCACGC ATTCGATGGA TTCGTCGCCG CGCGCATCGC GCAGATCGGC
GCCGCCGGCG GCGAGGTCCG CGTCGGCTTC CTCGGTCGCG ACGGCTTCCT GCCGCATCGG
CTCCGCGCGA AGGCCGGCGA CACGACGTCG CGCTATGTCG AGATCAGCCG CCGCGTCGGC
GTGATGGCGG CGGCGGCGAC GCTCGATCCG CTTGTCAGGC TGGTGCGCGA GATTCCGGCG
ATCGACGCGG TCGCCTTCGA AGGCCTGACC CGGCATCGCT CCAAGAAAGT GGCGGCGTTC
TTCGCGCGTC AGCCGCAGGG CCGGACCACC GGCCCCGAAC TCGCGAAGGC GCTGCCTGAG
CTGATCGACG CGCGCGAGAT CGCCGCGATC GCCGCGGCGC TGCGCGCCGA GCTGATGACC
TATCTGCGCG CGCAGTTTCC CGATCTCGAT CGCTGCACCG ATCTGGTTCT GGTCGATCTC
GGCTATTCCG GCAGCATCCA AAAATCGCTG CGGCGGGTGT TCGACCTGGA AGGCGTCTCC
GCACGGATTC ACGGGCTGTA TCTGCTGTCG CTCGACGACG GCTTCGTCGA CGGCGACGAC
CGCGACAGCT TCGAAGGCAT GATTTCCGAC ATCGTGGTGA CGCCGCACGT CAAACGCCTG
CTGCTGCGCA ACGTCGCGGT GCTGGAGCAG CTGTGCTGCG CGCCGACCGG TTCGGTCGAA
GGCTATCGCG ACGGCGCGGT GATCCGCGAG GCGGCGCTGC ACGCCGACGC GCAGCAGGCA
CTGGCCGGCG AGGTGCAGGC CGGCGTACTC GCTTATGCGG CGGAAGCCGC GGCGCTGGCG
CCGCAATTGC GCTTCGCGCC GATCGCCGAC CCGGCGCGCG ACGCCGCCAA CGTCGTGACG
ATGCTCGGGC GGCTGCTGCT ACAGCCGACC GACGACGAAC TGATGCTGCT GGGATCGCTG
CAGCACGACG TCAATCTCGG CACCACCGCG CTGACGCCGC TGCTCGACGC CGAGCTGCTG
GCGGCCCGCC AGGTGACGCA GTCGCTGCCC GACGCCTGCA CCGCGGCCGA TCCGCCGATG
TGGCTGGCCG GCTCGTTCGC CGCCTTGGCG CCGGCGCAGA GCTATTTGTA TCTGCTGTTC
GGCTGCAACC TGCTGCCGTC GGACCTGTTC GGCGACGTCA AATGCGGCCG GATCGACGTC
GTGCTGCAGG ATCGCAAGGG CGTCGCGACC ACCGTTCCGG TCGCCTGCTA TCGCGACGGC
TTCAACGCGA TCCGGATCCG GATTCCGATG TCGCAGGCGA TGGCGATCCG CGCCATCAGC
GTGCCGATCG CCACGCTGGC GACCGAGGGA CGCATCAGCG GCCCGTTCCT GCAGAGCGGC
GCGAGCATCA AGCTGGCGGC GCGCAGCGGC GAGATCCGGC TGCTCGATCG CGCCGCGGCC
GCACAGGACG GCATCGCCTG GGACGGCGAT CGCTACGCCG CCACGCGCGA CGACGCCGTG
CTGACGATCG AGCTTCCGAC GCTGACCGAT GCGGTGGCGA TGCTGAGCAT CGGCGTGACG
CCCGCGGGCG GCGCGCGGGT GCTGGCGTTG GGCTGA
|
|---|
| Protein sequence | MNVHIAETNR FKPKYSDANF VSFDVFDTFI VRGCTTPDGV IERAFQSSPA ANRFPAAAGS
YVEHRRQAEA RARKAAIRND GRAEIGIAEI YAVFPFRLFG LSKEALPHLV AAEFAAEHEL
CRCNPDILAR YRELRAAGAR TGFISDSYWS AEQLASLLRA CCPDLQWDFL YSSSDSGTGK
AEKLFGIYLA EHAVDPRRAV HIGDNPIADI DGARRFDISA LHVPQASAQL AAIFNREAPA
GRLLCQAPVG TLDGGVRTLR RLVAARVPRR SPAFDFGADV LGPVMHAFDG FVAARIAQIG
AAGGEVRVGF LGRDGFLPHR LRAKAGDTTS RYVEISRRVG VMAAAATLDP LVRLVREIPA
IDAVAFEGLT RHRSKKVAAF FARQPQGRTT GPELAKALPE LIDAREIAAI AAALRAELMT
YLRAQFPDLD RCTDLVLVDL GYSGSIQKSL RRVFDLEGVS ARIHGLYLLS LDDGFVDGDD
RDSFEGMISD IVVTPHVKRL LLRNVAVLEQ LCCAPTGSVE GYRDGAVIRE AALHADAQQA
LAGEVQAGVL AYAAEAAALA PQLRFAPIAD PARDAANVVT MLGRLLLQPT DDELMLLGSL
QHDVNLGTTA LTPLLDAELL AARQVTQSLP DACTAADPPM WLAGSFAALA PAQSYLYLLF
GCNLLPSDLF GDVKCGRIDV VLQDRKGVAT TVPVACYRDG FNAIRIRIPM SQAMAIRAIS
VPIATLATEG RISGPFLQSG ASIKLAARSG EIRLLDRAAA AQDGIAWDGD RYAATRDDAV
LTIELPTLTD AVAMLSIGVT PAGGARVLAL G
|
|---|
| |