Gene RPB_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0716 
Symbol 
ID3910012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp803375 
End bp804493 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content66% 
IMG OID637882608 
Productvon Willebrand factor, type A 
Protein accessionYP_484338 
Protein GI86747842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA TCACACTCAT GAAAGCGCTG GCCTTCACCG CGCTGCTCGC GCCGCTGGCG 
CTTCCCTCCA CCGCAAGCGC GCGGCCGACG GTCGAAGTCG CCTTCGTGCT CGACACCACC
GGATCGATGA GCGGCCTGAT CGAGGGCGCT AAGCGCAAGA TCTGGTCGAT CGCCACTGCG
ATCCTCGACA GCAATCCCGA CGCCGACATC CGGATGGGGC TGGTGATGTA TCGCGACATC
GGCGACGACT ACGTCACCCG CCGCGTCGAG TTGACCTCCG ACATTCAGGA CCTCTATGCG
CGGCTGCTGG AGCTGCAGGC GCGCGGCGGC GGCGACTGGC CGGAAAGCGT CAACGAGGCG
CTCGACGTCG CGGTCAACAA GCTGCACTGG ACAAAGGAGG GCGACATCTG CCGGATCGTG
TTCCTGGTCG GCGATGCGCC GCCGCATATG GACTACGCCC AGGACACCAA ATATCCGACC
ACGCTGGCGG TGGCGCGGCA GAAGGACATC ATCGTCAACG CCGTGCAGGC CGGCCACGCA
CGCGATACCG AGCGGGTGTG GCACGAGATC GCCGAAAGCG GGCGCGGCCG CTACATTCCG
ATCCCGCAGG ATGGCGGCCA GATCGTGGTG ATCGAGACGC CCTACGACCA GGACATCATC
ATCCTGCAGA ACCGGATCAA CGGCACCGTG ATCCCCTACG GTCCCGCGCC GATCCAGAAA
CGCACCGAAG ATCAGACCCG ACAATTGTCG AAAGTCGCCG CATCGGCGCC CGCTTCCGCC
TCCGACATGG CGAGCTACAT CAACAAGCGG GCGCGCACCT CGTCCGAAGC CGTCACCGGC
GGCGGCGATC TGGTCAGCGA CGTCATCGCC GGACGGCAGA AGCTCGACGC CGTCAAGGAC
GAGGACCTGC CCGACGCCCT GCGCAGCCTG CCGGCCGAGC AGCGCGCCGC CAAAGTGGAA
TCCGAAATGG CCGCGCGAAA GACGCTGAAC GAACAACTCG CCACGCTGGT CAAGCAGCGC
GACGCCTATC TGGCGGCGCA GCGCGACAAG CAACCCAAGC CGGCCTCGTC GTTCGATCGC
GAAGTCGAAG CGACGCTGAA GGCGCAATTG AAACGGTAG
 
Protein sequence
MTRITLMKAL AFTALLAPLA LPSTASARPT VEVAFVLDTT GSMSGLIEGA KRKIWSIATA 
ILDSNPDADI RMGLVMYRDI GDDYVTRRVE LTSDIQDLYA RLLELQARGG GDWPESVNEA
LDVAVNKLHW TKEGDICRIV FLVGDAPPHM DYAQDTKYPT TLAVARQKDI IVNAVQAGHA
RDTERVWHEI AESGRGRYIP IPQDGGQIVV IETPYDQDII ILQNRINGTV IPYGPAPIQK
RTEDQTRQLS KVAASAPASA SDMASYINKR ARTSSEAVTG GGDLVSDVIA GRQKLDAVKD
EDLPDALRSL PAEQRAAKVE SEMAARKTLN EQLATLVKQR DAYLAAQRDK QPKPASSFDR
EVEATLKAQL KR